Align Aspartate-semialdehyde dehydrogenase 2; ASA dehydrogenase 2; ASADH 2; Aspartate-beta-semialdehyde dehydrogenase 2; EC 1.2.1.11 (characterized)
to candidate WP_024851459.1 N745_RS0107250 aspartate-semialdehyde dehydrogenase
Query= SwissProt::P23247
(337 letters)
>NCBI__GCF_000526715.1:WP_024851459.1
Length = 340
Score = 431 bits (1108), Expect = e-125
Identities = 216/339 (63%), Positives = 265/339 (78%), Gaps = 3/339 (0%)
Query: 1 MSQQFNVAIFGATGAVGETMLEVLQEREFPVDELFLLASERSEGKTYRFNGKTVRVQNVE 60
M++++++A+ GATGAVGET+L+VL+ER FPV +L+ LAS RS GK F G V ++++
Sbjct: 1 MTKKYDIAVVGATGAVGETILKVLEERNFPVGKLYPLASSRSAGKKLEFRGSWVEIEDLA 60
Query: 61 EFDWSQVHIALFSAGGELSAKWAPIAAEAGVVVIDNTSHFRYDYDIPLVVPEVNPEAIAE 120
FD+S+V I LFS G +S ++AP AA AG VV+DNTS FRYD DIPLVVPEVNP+A+A
Sbjct: 61 TFDFSKVQIGLFSPGASISREYAPKAAAAGCVVVDNTSEFRYDDDIPLVVPEVNPQAVAG 120
Query: 121 FRNRNIIANPNCSTIQMLVALKPIYDAVGIERINVTTYQSVSGAGKAGIDELAGQTAKLL 180
++NR IIANPNCSTIQMLVALKPIYDAVGI RINV TYQ+VSG+GK I+ELA QTA +L
Sbjct: 121 YKNRGIIANPNCSTIQMLVALKPIYDAVGISRINVCTYQAVSGSGKEAIEELAKQTANIL 180
Query: 181 NGYPAETNTFSQQIAFNCIPQIDQFMDNGYTKEEMKMVWETQKIFNDPSIMVNPTCVRVP 240
N P ETN + +QIAFNCIPQID F DNGYTKEEMKMVWET+KI D +I+VNPT VRVP
Sbjct: 181 NLKPVETNVYPKQIAFNCIPQIDVFQDNGYTKEEMKMVWETKKIMGDDAILVNPTAVRVP 240
Query: 241 VFYGHAEAVHVETRAPIDAEQVMDMLEQTDGIELFR---GADFPTQVRDAGGKDHVLVGR 297
VF+GH+EAVH+ET+ I A+Q ++ + DGI L +PT V DA + V VGR
Sbjct: 241 VFFGHSEAVHIETKEKITAKQAKEIFGKADGIVLVDEHVDGGYPTAVTDAVDTNPVYVGR 300
Query: 298 VRNDISHHSGINLWVVADNVRKGAATNAVQIAELLVRDY 336
VR DIS G++LWVVADNVRKGAATN VQIAELL++DY
Sbjct: 301 VREDISCEKGLDLWVVADNVRKGAATNTVQIAELLIKDY 339
Lambda K H
0.319 0.135 0.395
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 390
Number of extensions: 15
Number of successful extensions: 2
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 337
Length of database: 340
Length adjustment: 28
Effective length of query: 309
Effective length of database: 312
Effective search space: 96408
Effective search space used: 96408
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 49 (23.5 bits)
Align candidate WP_024851459.1 N745_RS0107250 (aspartate-semialdehyde dehydrogenase)
to HMM TIGR01296 (asd: aspartate-semialdehyde dehydrogenase (EC 1.2.1.11))
../bin/blast/fastacmd -i /tmp/list.15938.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.15938.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.
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