Align Ribose-phosphate pyrophosphokinase; RPPK; 5-phospho-D-ribosyl alpha-1-diphosphate synthase; Phosphoribosyl diphosphate synthase; Phosphoribosyl pyrophosphate synthase; P-Rib-PP synthase; PRPP synthase; PRPPase; EC 2.7.6.1 (characterized)
to candidate WP_026191050.1 M446_RS29340 ribose-phosphate pyrophosphokinase
Query= SwissProt::P0A1V6
(315 letters)
>NCBI__GCF_000019365.1:WP_026191050.1
Length = 314
Score = 327 bits (838), Expect = 2e-94
Identities = 168/313 (53%), Positives = 231/313 (73%), Gaps = 3/313 (0%)
Query: 2 PDMKLFAGNATPELAQRIANRLYTSLGDAAVGRFSDGEVSVQINENVRGGDIFIIQSTCA 61
P +K+ AGNA LA+ IA L L +V RF+D E+ V++ ENVRG D+FI+QST
Sbjct: 3 PSIKIVAGNANRPLAEAIAAYLEQPLALCSVRRFADMEIFVELQENVRGEDVFIVQSTSF 62
Query: 62 PTNDNLMELVVMVDALRRASAGRITAVIPYFGYARQDRRVRSARVPITAKVVADFLSSVG 121
P ND+LMEL++M+DA RR+SA RITAVIPYFGYARQDRR S R PI+AK+VA+ ++ G
Sbjct: 63 PANDHLMELLIMIDAARRSSARRITAVIPYFGYARQDRRT-SGRTPISAKLVANLITEAG 121
Query: 122 VDRVLTVDLHAEQIQGFFDVPVDNVFGSPILLEDMLQ-LNLDNPIVVSPDIGGVVRARAI 180
DRV+T+DLHA QIQGFFD+P DN+F +P+++ D+ + L+ + +VVSPD+GGVVRARA+
Sbjct: 122 ADRVMTLDLHAGQIQGFFDIPTDNLFAAPVMVRDIKERLDPADMMVVSPDVGGVVRARAL 181
Query: 181 AKLLNDTDMAIIDKRRPRANVSQVMHIIGDVAGRDCVLVDDMIDTGGTLCKAAEALKERG 240
AK + D +AI+DKRR R S+VM+IIG+V GR C+LVDD++D+GGTL AAEAL G
Sbjct: 182 AKRI-DVPLAIVDKRRERPGESEVMNIIGEVEGRSCILVDDIVDSGGTLVNAAEALLAHG 240
Query: 241 AKRVFAYATHPIFSGNAANNLRNSVIDEVVVCDTIPLTDEIKALPNVRTLTLSGMLAEAI 300
AK V AY TH + SG A + + +S + E+V+ D+I T +K N+R +T++ +L EAI
Sbjct: 241 AKDVSAYITHGVLSGGAVSRIASSKLKELVITDSIQPTAAVKLARNIRAVTIAPLLGEAI 300
Query: 301 RRISNEESISAMF 313
R + E S+S++F
Sbjct: 301 GRTAEESSVSSLF 313
Lambda K H
0.322 0.137 0.386
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 288
Number of extensions: 12
Number of successful extensions: 4
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 315
Length of database: 314
Length adjustment: 27
Effective length of query: 288
Effective length of database: 287
Effective search space: 82656
Effective search space used: 82656
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 48 (23.1 bits)
Align candidate WP_026191050.1 M446_RS29340 (ribose-phosphate pyrophosphokinase)
to HMM TIGR01251 (prs: ribose-phosphate diphosphokinase (EC 2.7.6.1))
../bin/blast/fastacmd -i /tmp/list.5063.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.5063.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.
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