Align Aspartate-semialdehyde dehydrogenase 2; ASA dehydrogenase 2; ASADH 2; Aspartate-beta-semialdehyde dehydrogenase 2; EC 1.2.1.11 (characterized)
to candidate WP_026607484.1 METAC_RS0113665 aspartate-semialdehyde dehydrogenase
Query= SwissProt::P23247 (337 letters) >NCBI__GCF_000427445.1:WP_026607484.1 Length = 344 Score = 325 bits (833), Expect = 1e-93 Identities = 169/332 (50%), Positives = 229/332 (68%), Gaps = 5/332 (1%) Query: 5 FNVAIFGATGAVGETMLEVLQEREFPVDELFLLASERSEGKTYRFNGKTVRVQNVEEFDW 64 F VA+ GATG VG ML++L ER+FP+ E+ LAS RS G F KT++ + ++ +D+ Sbjct: 3 FKVAVVGATGNVGREMLDILAERQFPIAEIIALASSRSLGTEVSFGDKTLKCKALDNYDF 62 Query: 65 SQVHIALFSAGGELSAKWAPIAAEAGVVVIDNTSHFRYDYDIPLVVPEVNPEAIAEFRNR 124 S I L SAGG +S +W+P A G VVIDN+S +RYD D+PL+VPEVN +AIA F + Sbjct: 63 SGTDICLMSAGGAVSKEWSPKIARQGCVVIDNSSAWRYDQDVPLIVPEVNADAIAGFAKK 122 Query: 125 NIIANPNCSTIQMLVALKPIYDAVGIERINVTTYQSVSGAGKAGIDELAGQTAKLLNGYP 184 NIIANPNCST Q++VALKP++D I R+ V+TYQSVSGAGK +D L +T + Sbjct: 123 NIIANPNCSTAQLVVALKPLHDKAKITRVVVSTYQSVSGAGKEAMDALFAETRAIFVSDA 182 Query: 185 AETNTFSQQIAFNCIPQIDQFMDNGYTKEEMKMVWETQKIFNDPSIMVNPTCVRVPVFYG 244 E+ F ++IAFN IP+ID FM++GYTKEE KM+ ET+KI DP I ++ TCVRVPVF G Sbjct: 183 VESKKFPKRIAFNVIPEIDVFMEDGYTKEEWKMMAETKKIL-DPKIKLSATCVRVPVFIG 241 Query: 245 HAEAVHVETRAPIDAEQVMDMLEQTDG---IELFRGADFPTQVRDAGGKDHVLVGRVRND 301 H+EAV++E PI A++ D+L + G I+ + T +A G+D + R+R D Sbjct: 242 HSEAVNIEFENPISADEARDILREAPGCLVIDKREPGGYITP-HEAAGEDATYISRIRED 300 Query: 302 ISHHSGINLWVVADNVRKGAATNAVQIAELLV 333 + +G+ LWVVADN+RKGAA NAVQIAE+L+ Sbjct: 301 PTVDNGLVLWVVADNLRKGAALNAVQIAEVLI 332 Lambda K H 0.319 0.135 0.395 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 1 Number of Hits to DB: 323 Number of extensions: 16 Number of successful extensions: 3 Number of sequences better than 1.0e-02: 1 Number of HSP's gapped: 1 Number of HSP's successfully gapped: 1 Length of query: 337 Length of database: 344 Length adjustment: 28 Effective length of query: 309 Effective length of database: 316 Effective search space: 97644 Effective search space used: 97644 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 49 (23.5 bits)
Align candidate WP_026607484.1 METAC_RS0113665 (aspartate-semialdehyde dehydrogenase)
to HMM TIGR01296 (asd: aspartate-semialdehyde dehydrogenase (EC 1.2.1.11))
../bin/blast/fastacmd -i /tmp/list.26405.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.26405.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.
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