Alignments for a candidate for hisC in Maridesulfovibrio bastinii DSM 16055

Align histidinol-phosphate aminotransferase (EC 2.6.1.9) (characterized)
to candidate WP_027177671.1 G496_RS0101255 histidinol-phosphate transaminase

Query= reanno::DvH:206463
         (373 letters)



>NCBI__GCF_000429985.1:WP_027177671.1
          Length = 366

 Score =  379 bits (972), Expect = e-110
 Identities = 179/359 (49%), Positives = 254/359 (70%)

Query: 12  VRPEVLDFKPYVPGLSIDEIRDRFGLADVVKLASNENPLGTSPVVQRTLKTKADLAFRYA 71
           VRPEV+  KPY PGL+I+EI++++GL  V+KLASNENPLGTSP+VQ+T+   A   FRY 
Sbjct: 6   VRPEVMATKPYAPGLTIEEIKEKYGLDTVIKLASNENPLGTSPIVQKTVAKHAANIFRYP 65

Query: 72  QSGNPRLTRAIAAHHGVAPERVVAGNGSDEIIDLLIRVRATPGKHNIVAFRPCFSIYELQ 131
           Q+GNPRL +AI+   GV  + +++GNGSDEIIDL+IRV+A PG+  ++ +  CFS+Y L 
Sbjct: 66  QNGNPRLNKAISEKIGVDEKCIISGNGSDEIIDLIIRVKAQPGRDEVITYESCFSMYSLM 125

Query: 132 AKFCGLEFRQADLRPDFTFDWDAFLAATDENTAIAFVTTPDNPSGWCPPVSELEHVARTL 191
           ++ CG++F+Q     +F         A  ENTA  F+T+PDNP+G    V E+   A  +
Sbjct: 126 SRLCGIKFKQLQRNENFKQPVLEIARAATENTAAVFITSPDNPTGLAVSVDEIRQAAEIM 185

Query: 192 PPSCLFVIDEAYMDFCGDEAAHSLLSRLDAFPNIAVLRTFSKSFGLAGLRLGYGILPERL 251
           P   +FV+DEAY+DF      ++++  L  FPN+ + RTFSK++GLAGLR+GYGI+ E L
Sbjct: 186 PSETIFVVDEAYIDFASPAEKYNMIPLLREFPNLVLTRTFSKAYGLAGLRVGYGIMHEDL 245

Query: 252 ADYLHRVRLPFSVNILAEEAGLAALEDTVFRSETLRVTAEGRAYIAEGLTALGCEVMPSW 311
           ADY+ R R PF+VN++AEEA +AAL D +F +ETL+V  EG+  I +GL  LGC+V+PS 
Sbjct: 246 ADYITRARAPFTVNLIAEEAAIAALNDDIFYNETLKVVKEGKQQITDGLEKLGCKVLPSQ 305

Query: 312 ANFIMFRPPTDATDLFEALLRRGIIIRPLKSYGLPQHLRVSVGNADENRRFIEACKEIL 370
           +NF+MF PP  A  LFE LL++G+I+R LKS+G   ++RV++G A EN  F++   EI+
Sbjct: 306 SNFVMFTPPCSAQKLFEELLKKGVIVRYLKSFGYSDYIRVNMGTARENDVFLKQAAEII 364


Lambda     K      H
   0.323    0.139    0.422 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 419
Number of extensions: 15
Number of successful extensions: 2
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 373
Length of database: 366
Length adjustment: 30
Effective length of query: 343
Effective length of database: 336
Effective search space:   115248
Effective search space used:   115248
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 49 (23.5 bits)

Align candidate WP_027177671.1 G496_RS0101255 (histidinol-phosphate transaminase)
to HMM TIGR01141 (hisC: histidinol-phosphate transaminase (EC 2.6.1.9))

Software error:

../bin/blast/fastacmd -i /tmp/list.8000.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.8000.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.

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