Alignments for a candidate for hisC in Maridesulfovibrio bastinii DSM 16055

Align Histidinol-phosphate aminotransferase; EC 2.6.1.9; Imidazole acetol-phosphate transaminase (uncharacterized)
to candidate WP_027177823.1 G496_RS0102180 histidinol-phosphate transaminase

Query= curated2:A4IQ80
         (365 letters)



>NCBI__GCF_000429985.1:WP_027177823.1
          Length = 369

 Score =  240 bits (613), Expect = 4e-68
 Identities = 140/343 (40%), Positives = 196/343 (57%), Gaps = 3/343 (0%)

Query: 3   VKEQLRGLPPYQPGKSIEEVKQEYGLSEIIKLASNENPYGSSPTVKSAIAA-ELDRLAVY 61
           V   +R   PY+P     E+ + +GL ++ +L +NEN  G SP V + +   E   + +Y
Sbjct: 9   VPAHIRLFDPYRPSPPDSELMRLFGLKKLYRLNNNENVLGPSPDVCNLLKGIESGLVPIY 68

Query: 62  PDGYARALREKVANHLGVKETQLLFGNGSDEVVQIFCRAFLEPGTNTVMATPTFPQYRHN 121
           P G ++ LRE ++  LG   +Q L GNGS E++    +AF EPG N V A  TF  Y   
Sbjct: 69  PHGDSQDLREALSLRLGPDRSQFLVGNGSCELISSVVKAFCEPGDNIVTADKTFAVYEWV 128

Query: 122 AIIERAEVREVPLVDGR-HDLEAMLKEIDENTRIVWVCNPNNPTGTYVNETELRAFLDRV 180
           A     E R +PL   +  D EAML  ID+ T++V+VCNPNNPTGTY +ET +R F+DRV
Sbjct: 129 AEFSGIEARLIPLDQKQGFDPEAMLAAIDDRTKLVFVCNPNNPTGTYWDETAMRHFMDRV 188

Query: 181 PSHVLVVLDEAYYEYVTADDYPQTVPLLQEYEQLVIMRTFSKAYGLAALRVGYGIASESL 240
               +VV DEAY+EYV   DYP  + LLQEY  LV+ RTFSK + LAALRVGY  ASE +
Sbjct: 189 GERCIVVADEAYFEYVEKPDYPDCIKLLQEYPNLVVFRTFSKMFALAALRVGYLCASEEV 248

Query: 241 IRAVEPAREPFNTSTIAQAAAAVA-LDDQAFIRACVEQNRAELERYYRFCEEHGLKYYPS 299
              +  A   ++ +TIAQ AA  A LD+ AFI    +  R   E   + CE  GL+Y   
Sbjct: 249 TDIISRAHVAYSVNTIAQLAARSAILDESAFIADTRDMVRQGREIIRKTCESLGLEYIIG 308

Query: 300 QTNFLFIDFGMDGNEVFQYLLERGIIVRSGKALGLPTGVRITV 342
           + N++ +   M    + + LL RG +VR+      P  +R+++
Sbjct: 309 EGNYVMVRTPMSDTLLQRKLLRRGFLVRTMTGFRFPNWIRVSL 351


Lambda     K      H
   0.318    0.136    0.389 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 321
Number of extensions: 14
Number of successful extensions: 4
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 365
Length of database: 369
Length adjustment: 30
Effective length of query: 335
Effective length of database: 339
Effective search space:   113565
Effective search space used:   113565
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 49 (23.5 bits)

Align candidate WP_027177823.1 G496_RS0102180 (histidinol-phosphate transaminase)
to HMM TIGR01141 (hisC: histidinol-phosphate transaminase (EC 2.6.1.9))

Software error:

../bin/blast/fastacmd -i /tmp/list.22543.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.22543.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.

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