Alignments for a candidate for hisG in Maridesulfovibrio bastinii DSM 16055

Align ATP phosphoribosyltransferase (EC 2.4.2.17) (characterized)
to candidate WP_027178293.1 G496_RS0104855 ATP phosphoribosyltransferase

Query= reanno::DvH:209044
         (293 letters)



>NCBI__GCF_000429985.1:WP_027178293.1
          Length = 291

 Score =  417 bits (1073), Expect = e-121
 Identities = 206/287 (71%), Positives = 238/287 (82%)

Query: 7   MKLGIPKGSLEEATINLLARSGWKIRKHHRNYFPEINDPELTARLCRVQEIPRYIEDGIL 66
           +KLG+PKGSL++ATI L A+SGWKI  HHRNYFP+IND ++   +CR QE+  Y+  G L
Sbjct: 5   LKLGVPKGSLQDATIKLFAKSGWKIGLHHRNYFPDINDEDINCSMCRAQEMSAYVASGTL 64

Query: 67  DVGLTGKDWLLETGSDVVVVSDLVYSKVSNRPARWVLAVAGDSPYTRPEDLAGKRIATEL 126
           DVGLTGKDW+LE  SDVV VS LVYSKVSNRPARWVLAVAGDSPY RPEDLAGK+IATEL
Sbjct: 65  DVGLTGKDWILENDSDVVEVSSLVYSKVSNRPARWVLAVAGDSPYKRPEDLAGKKIATEL 124

Query: 127 LGVTKRYFADAGIEVNVQYSWGATEAKVVEGLADAIVEVTETGTTIKAHGLRIISEVLLT 186
           + VTK YF    I V+V +SWGATEAKVVEGL D IVEVTETGTTIKAHGLRII+EV+ T
Sbjct: 125 VNVTKNYFKSQNIPVDVDFSWGATEAKVVEGLCDGIVEVTETGTTIKAHGLRIIAEVMQT 184

Query: 187 NTVLIANRAAWEDPCRRRKIEQIDLLLQGALRADSLVGLKMNVPTRCLDAVLDQLPSLNS 246
           NT LIAN+ AWEDP +R+KIE+I+LLLQGAL+A+ +VGLKMN+P   LD+ +  LPSLNS
Sbjct: 185 NTRLIANKKAWEDPWKRKKIEKINLLLQGALKAEKMVGLKMNLPKDNLDSAMKILPSLNS 244

Query: 247 PTVAGLRDNTWFAVEIVVDNGVVRDLIPRLREAGAEGIIEYALNKVI 293
           PTVA L DN W +VEI+VD  VVRDLIP L+E GAEGIIEY LNKVI
Sbjct: 245 PTVAELSDNKWISVEIMVDETVVRDLIPELKELGAEGIIEYPLNKVI 291


Lambda     K      H
   0.319    0.137    0.402 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 332
Number of extensions: 9
Number of successful extensions: 1
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 293
Length of database: 291
Length adjustment: 26
Effective length of query: 267
Effective length of database: 265
Effective search space:    70755
Effective search space used:    70755
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 48 (23.1 bits)

Align candidate WP_027178293.1 G496_RS0104855 (ATP phosphoribosyltransferase)
to HMM TIGR00070 (hisG: ATP phosphoribosyltransferase (EC 2.4.2.17))

Software error:

../bin/blast/fastacmd -i /tmp/list.16356.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.16356.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.

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