Alignments for a candidate for asp-kinase in Maridesulfovibrio bastinii DSM 16055

Align Aspartate kinase Ask_LysC; Aspartokinase; EC 2.7.2.4 (characterized)
to candidate WP_027179521.1 G496_RS0112150 aspartate kinase

Query= SwissProt::A4VJB4
         (412 letters)



>NCBI__GCF_000429985.1:WP_027179521.1
          Length = 412

 Score =  417 bits (1072), Expect = e-121
 Identities = 216/407 (53%), Positives = 297/407 (72%), Gaps = 1/407 (0%)

Query: 1   MALIVQKFGGTSVGTVERIEQVAEKVKKFRDGGDDIVVVVSAMSGETNRLIDLAKQISEQ 60
           M ++VQKFGGTSV  ++ ++QV EKV    + G+ +VVV+SAMSGETNRL+ LA + S  
Sbjct: 1   MNIVVQKFGGTSVRNLKCMKQVLEKVLVPYNKGNKVVVVLSAMSGETNRLLGLADEWSST 60

Query: 61  PVPRELDVMVSTGEQVTIALLAMALIKRGVPAVSYTGNQVRILTDSAHTKARILQIDAQR 120
           P   ELD +VSTGEQV+ AL  M L  +G+ A S  G Q  I T+SA T+ARIL ID ++
Sbjct: 61  PDKAELDSLVSTGEQVSTALFTMLLKDKGIKARSLLGFQAPIKTNSAFTRARILNIDNEK 120

Query: 121 IQRDIKAGRVVVVAGFQGVDEKGNITTLGRGGSDTTGVALAAALKADECQIYTDVDGVYT 180
           I+  ++   ++VVAGFQG DE   ITTLGRGGSDT+ VA+AA LKA+ C+I+TDV GV+T
Sbjct: 121 IKSMLEEYDILVVAGFQGCDENQRITTLGRGGSDTSAVAIAAVLKAEVCEIFTDVPGVFT 180

Query: 181 TDPRVVAKAQRLDKITFEEMLEMASLGSKVLQIRAVEFAGKYSVPLRVLHSFQEGPGTLI 240
           TDP + ++A++LD +T++EMLEMAS+G+KVLQIR+VEFA KY+V + V  +F +  GT +
Sbjct: 181 TDPNICSQARKLDTVTYDEMLEMASMGAKVLQIRSVEFAKKYNVKVHVRSTFSDEIGTYV 240

Query: 241 TLDEEESMEQPIISGIAFNRDEAKLTIRGVPDTPGVAFKILGPISAANVEVDMIVQNVAH 300
           T  E++ ME  ++SGIA+++D+A++T+  V D PGV+  +  PI+   + VDMIVQN + 
Sbjct: 241 T-QEDKKMESLLVSGIAYDKDQARITLARVKDVPGVSASLFTPIAEQGILVDMIVQNPSR 299

Query: 301 DNTTDFTFTVHRNDYNNALQVLQGIAAEMGAREAIGDTNIAKVSIVGVGMRSHAGVASRM 360
           D  TD TFTV R D N  L+++  I  EMG  E + D N+ K+S++GVGMR+H+GVAS+ 
Sbjct: 300 DGRTDMTFTVPRADLNKTLEIIDSIREEMGTEEVLYDKNVCKISVIGVGMRNHSGVASKA 359

Query: 361 FEALAKENINIQMISTSEIKVSVVIEEKYLELAVRALHTAFELDAPA 407
           F+AL ++NINI MISTSEIK++ +IEEKY ELA+R LH  F LD  A
Sbjct: 360 FKALREDNINILMISTSEIKITCLIEEKYTELAIRTLHNTFGLDQSA 406


Lambda     K      H
   0.317    0.133    0.357 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 443
Number of extensions: 14
Number of successful extensions: 2
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 412
Length of database: 412
Length adjustment: 31
Effective length of query: 381
Effective length of database: 381
Effective search space:   145161
Effective search space used:   145161
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 50 (23.9 bits)

Align candidate WP_027179521.1 G496_RS0112150 (aspartate kinase)
to HMM TIGR00656 (aspartate kinase, monofunctional class (EC 2.7.2.4))

Software error:

../bin/blast/fastacmd -i /tmp/list.25135.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.25135.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.

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