Align acetolactate synthase (subunit 1/2) (EC 2.2.1.6) (characterized)
to candidate WP_027722534.1 H589_RS0113595 acetolactate synthase small subunit
Query= BRENDA::P9WKJ3
(168 letters)
>NCBI__GCF_000425265.1:WP_027722534.1
Length = 160
Score = 154 bits (388), Expect = 9e-43
Identities = 77/154 (50%), Positives = 111/154 (72%)
Query: 6 HTLSVLVEDKPGVLARVAALFSRRGFNIESLAVGATECKDRSRMTIVVSAEDTPLEQITK 65
HTLSV VE++PGVL+RV LFS RGFNIESL V T + S MTI E+ +EQI K
Sbjct: 3 HTLSVTVENEPGVLSRVVGLFSGRGFNIESLNVAPTLEEGVSHMTISTIGEEQIIEQIVK 62
Query: 66 QLNKLINVIKIVEQDDEHSVSRELALIKVQADAGSRSQVIEAVNLFRANVIDVSPESLTV 125
QL KL+ VIK+V+ + SV RE+A++KV A+ R++++ V++FR V+DVS + L++
Sbjct: 63 QLRKLVTVIKVVDLTEHKSVEREMAILKVNAEDAKRAEILRIVDIFRCKVVDVSVDELSI 122
Query: 126 EATGNRGKLEALLRVLEPFGIREIAQSGMVSLSR 159
E TG+ GK+EA++ +L FGI+EIA++G V++ R
Sbjct: 123 EITGDNGKIEAIINLLSRFGIKEIARTGSVAMKR 156
Lambda K H
0.315 0.131 0.347
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 88
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 168
Length of database: 160
Length adjustment: 18
Effective length of query: 150
Effective length of database: 142
Effective search space: 21300
Effective search space used: 21300
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 43 (21.2 bits)
Align candidate WP_027722534.1 H589_RS0113595 (acetolactate synthase small subunit)
to HMM TIGR00119 (ilvN: acetolactate synthase, small subunit (EC 2.2.1.6))
../bin/blast/fastacmd -i /tmp/list.29095.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.29095.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.
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