Alignments for a candidate for asp-kinase in Maridesulfovibrio zosterae DSM 11974

Align Aspartate kinase Ask_LysC; Aspartokinase; EC 2.7.2.4 (characterized)
to candidate WP_027722654.1 H589_RS0114245 aspartate kinase

Query= SwissProt::A4VJB4
         (412 letters)



>NCBI__GCF_000425265.1:WP_027722654.1
          Length = 412

 Score =  425 bits (1093), Expect = e-123
 Identities = 218/404 (53%), Positives = 301/404 (74%), Gaps = 1/404 (0%)

Query: 1   MALIVQKFGGTSVGTVERIEQVAEKVKKFRDGGDDIVVVVSAMSGETNRLIDLAKQISEQ 60
           M ++VQKFGGTSV  +E ++QV EKV      G+ ++VV+SAMSGETNRLIDLA + S+ 
Sbjct: 1   MNIVVQKFGGTSVRNLECMKQVLEKVMVPYSKGNKVIVVLSAMSGETNRLIDLANEWSDT 60

Query: 61  PVPRELDVMVSTGEQVTIALLAMALIKRGVPAVSYTGNQVRILTDSAHTKARILQIDAQR 120
           P   E+D +VSTGEQV+IAL +M L  RG+ A S  G Q+ I T+SAH++ARIL ID ++
Sbjct: 61  PDLAEMDSLVSTGEQVSIALFSMLLKDRGIKARSLLGFQIPIKTNSAHSRARILDIDNEK 120

Query: 121 IQRDIKAGRVVVVAGFQGVDEKGNITTLGRGGSDTTGVALAAALKADECQIYTDVDGVYT 180
           +   ++   ++VVAGFQG D    ITTLGRGGSDT+ VA+AAA+ AD C+I+TDV GV+T
Sbjct: 121 MMELLEENDILVVAGFQGCDAGKRITTLGRGGSDTSAVAIAAAISADVCEIFTDVPGVFT 180

Query: 181 TDPRVVAKAQRLDKITFEEMLEMASLGSKVLQIRAVEFAGKYSVPLRVLHSFQEGPGTLI 240
           TDP + ++A++LD ++++EMLEMAS+G+KVLQIR+VEFA KY+V + V  +F +  GT +
Sbjct: 181 TDPNICSQARKLDTVSYDEMLEMASMGAKVLQIRSVEFAKKYNVKVHVRSTFSDEIGTYV 240

Query: 241 TLDEEESMEQPIISGIAFNRDEAKLTIRGVPDTPGVAFKILGPISAANVEVDMIVQNVAH 300
           T  E+++ME  ++SGIA+++D+A++T+  V D PGV+  +  P++ A V VDMIVQN + 
Sbjct: 241 T-QEDKNMESVLVSGIAYDKDQARVTLAKVQDVPGVSATLFTPLAEAGVLVDMIVQNPSR 299

Query: 301 DNTTDFTFTVHRNDYNNALQVLQGIAAEMGAREAIGDTNIAKVSIVGVGMRSHAGVASRM 360
           D  TD TFT+ R D N  L++L  I   +GA+E + D N+ KVS++GVGMR+H+GVASR 
Sbjct: 300 DGRTDMTFTIPRADLNQTLKILDSIKESLGAQEVLYDQNVCKVSVIGVGMRNHSGVASRA 359

Query: 361 FEALAKENINIQMISTSEIKVSVVIEEKYLELAVRALHTAFELD 404
           F+AL  ENINI MISTSEIK++ +IEEKY ELA+R LH  F LD
Sbjct: 360 FQALRDENINILMISTSEIKITCLIEEKYTELAIRTLHNTFGLD 403


Lambda     K      H
   0.317    0.133    0.357 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 437
Number of extensions: 15
Number of successful extensions: 2
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 412
Length of database: 412
Length adjustment: 31
Effective length of query: 381
Effective length of database: 381
Effective search space:   145161
Effective search space used:   145161
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 50 (23.9 bits)

Align candidate WP_027722654.1 H589_RS0114245 (aspartate kinase)
to HMM TIGR00656 (aspartate kinase, monofunctional class (EC 2.7.2.4))

Software error:

../bin/blast/fastacmd -i /tmp/list.9962.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.9962.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.

For help, please send mail to the webmaster (help@microbesonline.org), giving this error message and the time and date of the error.