Alignments for a candidate for ilvI in Sulfurihydrogenibium subterraneum DSM 15120

Align acetohydroxyacid synthase subunit B (EC 2.2.1.6) (characterized)
to candidate WP_028951193.1 Q385_RS0108165 biosynthetic-type acetolactate synthase large subunit

Query= metacyc::MONOMER-18810
         (585 letters)



>NCBI__GCF_000619805.1:WP_028951193.1
          Length = 581

 Score =  618 bits (1594), Expect = 0.0
 Identities = 310/564 (54%), Positives = 404/564 (71%), Gaps = 7/564 (1%)

Query: 21  GAEILVHALAEEGVEYVWGYPGGAVLYIYDELHKQTKFEHILVRHEQAAVHAADGYARAT 80
           GA+I+V  L  EGV+ V+G PGGA++ +YD L     F +IL RHEQAA H ADGYARAT
Sbjct: 6   GADIVVDVLIHEGVDTVFGLPGGAIMEVYDALF-DAPFRNILTRHEQAACHMADGYARAT 64

Query: 81  GKVGVALVTSGPGVTNAVTGIATAYLDSIPMVVITGNVPTHAIGQDAFQECDTVGITRPI 140
           GKVGV + TSGPG TN VTG+ATAY+DSIP+V ITG VP H IG DAFQE D +GITRPI
Sbjct: 65  GKVGVVIATSGPGATNLVTGLATAYMDSIPLVAITGQVPRHYIGTDAFQEADVIGITRPI 124

Query: 141 VKHNFLVKDVRDLAATIKKAFFIAATGRPGPVVVDIPKDVSRNACKYEYPKSIDMRS--- 197
            KHNFLV D++DL   +++AF+IA TGRPGPV+VDIPKD+++   +Y  P   +++    
Sbjct: 125 TKHNFLVTDIKDLPLILRQAFYIARTGRPGPVLVDIPKDITQQVAEYYIPSDEEVKESLP 184

Query: 198 -YNPVNKGHSGQIRKAVALLQGAERPYIYTGGGVVLANASDELRQLAALTGHPVTNTLMG 256
            YNP  +G+  QI+KA  L++ A RP +Y GGG +L+ A++E+ +LA LT  PVT T MG
Sbjct: 185 GYNPHVEGNPVQIKKAAELIRKATRPVLYVGGGAILSGAAEEVTKLARLTKIPVTTTNMG 244

Query: 257 LGAFPGTSKQFVGMLGMHGTYEANMAMQNCDVLIAIGARFDDRVIGNPAHFTSQARKIIH 316
            GAFP T    + MLGMHGTY ANMA+ + D+LIA+G+RFDDRV G  + F  +A KIIH
Sbjct: 245 KGAFPETDPLSLHMLGMHGTYYANMAVYHSDLLIAVGSRFDDRVTGKISEFAPEA-KIIH 303

Query: 317 IDIDPSSISKRVKVDIPIVGNVKDVLQELIAQIKASDIKPKREALAKWWEQIEQWRSVDC 376
           IDIDP+SISK + VD+PIVG+VK+VLQ+LI +++   ++    A   W +QI++W+    
Sbjct: 304 IDIDPASISKTITVDVPIVGDVKNVLQKLIKELEEKPVEWVA-ARENWLKQIQEWKEKHP 362

Query: 377 LKYDRSSEIIKPQYVVEKIWELTKGDAFICSDVGQHQMWAAQFYKFDEPRRWINSGGLGT 436
           L Y +S +IIKPQYV+E+I+ +T GDA I + VGQHQMWAA FYK+  PR+++NSGGLGT
Sbjct: 363 LSYRKSDKIIKPQYVIEEIYNITNGDAIISAGVGQHQMWAAMFYKYSYPRQFLNSGGLGT 422

Query: 437 MGVGLPYAMGIKKAFPEKEVVTITGEGSIQMCIQELSTCLQYDTPVKICSLNNGYLGMVR 496
           MG G P ++G K   PEK V  I G+GS  M IQ+L+T +QY  PVKI  +NNG+LGMVR
Sbjct: 423 MGFGFPASVGAKIGRPEKTVFAIEGDGSFIMNIQDLATAVQYRVPVKIAIINNGFLGMVR 482

Query: 497 QWQEIEYDNRYSHSYMDALPDFVKLAEAYGHVGMRVEKTSDVEPALREAFRLKDRTVFLD 556
           QWQ+  YD+RY+   +   PDFVKLAE++G VG+R  K S+V   L +A  + DR V +D
Sbjct: 483 QWQQFFYDSRYASVCLSVQPDFVKLAESFGAVGLRATKPSEVREVLAKAMEINDRPVLID 542

Query: 557 FQTDPTENVWPMVQAGKGISEMLL 580
           F  D  ENV PMV AGK   +M+L
Sbjct: 543 FVVDREENVLPMVPAGKSYRDMIL 566


Lambda     K      H
   0.319    0.135    0.407 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 912
Number of extensions: 37
Number of successful extensions: 5
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 585
Length of database: 581
Length adjustment: 36
Effective length of query: 549
Effective length of database: 545
Effective search space:   299205
Effective search space used:   299205
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (25.0 bits)

Align candidate WP_028951193.1 Q385_RS0108165 (biosynthetic-type acetolactate synthase large subunit)
to HMM TIGR00118 (ilvB: acetolactate synthase, large subunit, biosynthetic type (EC 2.2.1.6))

Software error:

../bin/blast/fastacmd -i /tmp/list.1148.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.1148.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.

For help, please send mail to the webmaster (help@microbesonline.org), giving this error message and the time and date of the error.