Align Ketol-acid reductoisomerase (NADP(+)); KARI; Acetohydroxy-acid isomeroreductase; AHIR; Alpha-keto-beta-hydroxylacyl reductoisomerase; Ketol-acid reductoisomerase type 1; Ketol-acid reductoisomerase type I; EC 1.1.1.86 (characterized)
to candidate WP_029135046.1 A3GO_RS0120860 ketol-acid reductoisomerase
Query= SwissProt::C1DFH7
(338 letters)
>NCBI__GCF_000428045.1:WP_029135046.1
Length = 336
Score = 553 bits (1425), Expect = e-162
Identities = 275/338 (81%), Positives = 301/338 (89%), Gaps = 2/338 (0%)
Query: 1 MKVYYDKDCDLSIIQSKKVAIIGYGSQGHAHACNLKDSGVDVYVGLRAGSASVAKAEAHG 60
M +YYDKD DLS+IQ KKV I+GYGSQGHAHA NLKDSGVDV V LRAGSAS KAE G
Sbjct: 1 MNIYYDKDADLSLIQGKKVTIVGYGSQGHAHANNLKDSGVDVTVALRAGSASAVKAENAG 60
Query: 61 LTVKSVKDAVAAADVVMILTPDEFQGRLYKDEIEPNLKKGATLAFAHGFSIHYNQVVPRA 120
L VKSV++AVA AD+VM+LTPDEFQ LY+D++EP+LK+GATLAFAHGF+IHYNQVVPRA
Sbjct: 61 LKVKSVEEAVAEADLVMVLTPDEFQSVLYRDQLEPHLKQGATLAFAHGFAIHYNQVVPRA 120
Query: 121 DLDVIMIAPKAPGHTVRSEFVRGGGIPDLIAVYQDASGNAKNLALSYACGVGGGRTGIIE 180
DLDVIMIAPKAPGHTVRSEF RGGGIPDLIA+YQDASG AK++ALSYA +GGGRTGIIE
Sbjct: 121 DLDVIMIAPKAPGHTVRSEFERGGGIPDLIAIYQDASGQAKDIALSYASAIGGGRTGIIE 180
Query: 181 TTFKDETETDLFGEQAVLCGGCVELVKAGFETLVEAGYAPEMAYFECLHELKLIVDLMFE 240
TTFKDETETDLFGEQAVLCGG VELVKAGFETL EAGYAPEMAYFECLHELKLIVDLM+E
Sbjct: 181 TTFKDETETDLFGEQAVLCGGAVELVKAGFETLTEAGYAPEMAYFECLHELKLIVDLMYE 240
Query: 241 GGIANMNYSISNNAEYGEYVTGPEVINEQSRQAMRNALKRIQDGEYAKMFITEGAANYPS 300
GGIANMNYSISNNAEYGEYVTG +VIN++SR AMR LK IQ G YAK FI+EG +NYP
Sbjct: 241 GGIANMNYSISNNAEYGEYVTGSKVINDESRAAMRECLKNIQTGNYAKRFISEGQSNYPE 300
Query: 301 MTAYRRNNAAHQIEVVGEKLRTMMPWIAANKIVDKTKN 338
MTA RR NAAH IEVVGE+LR+MMPWI KIVDK+KN
Sbjct: 301 MTAMRRLNAAHDIEVVGERLRSMMPWI--KKIVDKSKN 336
Lambda K H
0.317 0.134 0.388
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 453
Number of extensions: 9
Number of successful extensions: 1
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 338
Length of database: 336
Length adjustment: 28
Effective length of query: 310
Effective length of database: 308
Effective search space: 95480
Effective search space used: 95480
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 49 (23.5 bits)
Align candidate WP_029135046.1 A3GO_RS0120860 (ketol-acid reductoisomerase)
to HMM TIGR00465 (ilvC: ketol-acid reductoisomerase (EC 1.1.1.86))
../bin/blast/fastacmd -i /tmp/list.19171.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.19171.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.
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