Align Ketol-acid reductoisomerase (NADP(+)); KARI; Acetohydroxy-acid isomeroreductase; AHIR; Alpha-keto-beta-hydroxylacyl reductoisomerase; Ketol-acid reductoisomerase type 1; Ketol-acid reductoisomerase type I; EC 1.1.1.86 (characterized)
to candidate WP_034992595.1 DL88_RS04530 ketol-acid reductoisomerase
Query= SwissProt::Q9HVA2 (338 letters) >NCBI__GCF_000745425.1:WP_034992595.1 Length = 339 Score = 468 bits (1205), Expect = e-137 Identities = 226/339 (66%), Positives = 273/339 (80%), Gaps = 1/339 (0%) Query: 1 MRVFYDKDCDLSIIQGKKVAIIGYGSQGHAHACNLKDSGV-DVTVGLRSGSATVAKAEAH 59 MRV+YD+D D+++++GKKVAIIGYGSQGHAHA NL+DSGV D+ + LR GSAT KAEA Sbjct: 1 MRVYYDRDADINLVKGKKVAIIGYGSQGHAHALNLRDSGVKDIAIALREGSATAKKAEAE 60 Query: 60 GLKVADVKTAVAAADVVMILTPDEFQGRLYKEEIEPNLKKGATLAFAHGFSIHYNQVVPR 119 GL V V A ADVVM+LTPDE Q +Y + +E NLK+GA L FAHG S+H+N + PR Sbjct: 61 GLAVKTVAEAAQWADVVMVLTPDELQADIYHQLLEKNLKQGAALLFAHGLSVHFNLITPR 120 Query: 120 ADLDVIMIAPKAPGHTVRSEFVKGGGIPDLIAIYQDASGNAKNVALSYACGVGGGRTGII 179 DLDV+M+APK PGHTVRSE+ +GGG+P LIA+ QDASGNA ++ALSYA +GGGR GII Sbjct: 121 PDLDVLMVAPKGPGHTVRSEYKRGGGVPCLIAVAQDASGNAHDIALSYASAIGGGRAGII 180 Query: 180 ETTFKDETETDLFGEQAVLCGGCVELVKAGFETLVEAGYAPEMAYFECLHELKLIVDLMY 239 ETTFK+E ETDLFGEQAVLCGG VEL++AGFETLVEAGYAPEMAYFECLHE+KLIVDL+Y Sbjct: 181 ETTFKEECETDLFGEQAVLCGGLVELIRAGFETLVEAGYAPEMAYFECLHEVKLIVDLIY 240 Query: 240 EGGIANMNYSISNNAEYGEYVTGPEVINAESRAAMRNALKRIQDGEYAKMFITEGAANYP 299 EGGIANMNYSISN AEYGEYVTGP +I E++A M+ L IQ G++ + ++ E + Sbjct: 241 EGGIANMNYSISNTAEYGEYVTGPRIITPETKAEMKRVLDDIQTGKFTRDWMLENKVHQT 300 Query: 300 SMTAYRRNNAAHPIEQIGEKLRAMMPWIAANKIVDKSKN 338 S A R AAHPIE++G LRAMMPWI A+K+VDK+KN Sbjct: 301 SFKATRARVAAHPIEKVGADLRAMMPWIGASKLVDKTKN 339 Lambda K H 0.317 0.134 0.389 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 1 Number of Hits to DB: 399 Number of extensions: 8 Number of successful extensions: 2 Number of sequences better than 1.0e-02: 1 Number of HSP's gapped: 1 Number of HSP's successfully gapped: 1 Length of query: 338 Length of database: 339 Length adjustment: 28 Effective length of query: 310 Effective length of database: 311 Effective search space: 96410 Effective search space used: 96410 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 49 (23.5 bits)
Align candidate WP_034992595.1 DL88_RS04530 (ketol-acid reductoisomerase)
to HMM TIGR00465 (ilvC: ketol-acid reductoisomerase (EC 1.1.1.86))
../bin/blast/fastacmd -i /tmp/list.6843.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.6843.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.
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