Align acetohydroxyacid isomeroreductase (EC 1.1.1.86) (characterized)
to candidate WP_038215898.1 Q392_RS26720 ketol-acid reductoisomerase
Query= metacyc::MONOMER-18814
(338 letters)
>NCBI__GCF_000745855.1:WP_038215898.1
Length = 338
Score = 581 bits (1498), Expect = e-171
Identities = 290/338 (85%), Positives = 306/338 (90%)
Query: 1 MKVFYDKDADLSLIKGKNVTIIGYGSQGHAHALNLKDSGVNVTVGLRKSGASWNKAANAG 60
MKVFYDKD DLSLIKGK V IIGYGSQGHAHA NL DSGV V VGLRK GASW K AG
Sbjct: 1 MKVFYDKDCDLSLIKGKTVAIIGYGSQGHAHAQNLNDSGVKVVVGLRKGGASWPKVEKAG 60
Query: 61 LQVKEVAEAVKGADVVMILLPDEQIADVYKNEVHDNIKEGAALAFAHGFNVHYGAVIPRA 120
L+V EVAEAVK ADVVMILLPDEQIA VYKN+V NIKEGA+L FAHGFNVHYG V PRA
Sbjct: 61 LKVAEVAEAVKQADVVMILLPDEQIASVYKNDVAPNIKEGASLVFAHGFNVHYGFVQPRA 120
Query: 121 DLDVIMIAPKAPGHTVRATYTQGGGVPHLIAVHQNKSGAARDIALSYATANGGGRAGIIE 180
DLDV M+APKAPGHTVR+TYTQGGGVPHL+AVHQ+KSG ARD+ALSYA ANGGG+AGIIE
Sbjct: 121 DLDVWMVAPKAPGHTVRSTYTQGGGVPHLVAVHQDKSGKARDLALSYAMANGGGKAGIIE 180
Query: 181 TNFREETETDLFGEQAVLCGGTVELIKAGFETLVEAGYAPEMAYFECLHELKLIVDLIYE 240
TNFREETETDLFGEQAVLCGGTVELIKAGFETLVEAGYAPEMAYFECLHELKLIVDLIYE
Sbjct: 181 TNFREETETDLFGEQAVLCGGTVELIKAGFETLVEAGYAPEMAYFECLHELKLIVDLIYE 240
Query: 241 GGIANMNYSISNNAEYGEYVTGPRVVTEETKKAMKQCLTDIQTGEYAKSFLLENKAGAPT 300
GGIANMNYSISNNAEYGEYVTGPR+VT+ETK MK+ L DIQTGEYAKSF+LEN AGAPT
Sbjct: 241 GGIANMNYSISNNAEYGEYVTGPRIVTDETKATMKKVLRDIQTGEYAKSFVLENAAGAPT 300
Query: 301 LISRRRLTAEHQIEEVGAKLRAMMPWIAKNKMVDQSKN 338
LISRRRL AEHQIE VG KLRAMMPWI KNK+VDQ++N
Sbjct: 301 LISRRRLNAEHQIEVVGEKLRAMMPWIKKNKLVDQTRN 338
Lambda K H
0.316 0.133 0.379
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 495
Number of extensions: 11
Number of successful extensions: 1
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 338
Length of database: 338
Length adjustment: 28
Effective length of query: 310
Effective length of database: 310
Effective search space: 96100
Effective search space used: 96100
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 49 (23.5 bits)
Align candidate WP_038215898.1 Q392_RS26720 (ketol-acid reductoisomerase)
to HMM TIGR00465 (ilvC: ketol-acid reductoisomerase (EC 1.1.1.86))
../bin/blast/fastacmd -i /tmp/list.13146.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.13146.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.
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