Alignments for a candidate for galU in Sulfuritalea hydrogenivorans DSM 22779

Align UTP-glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) (characterized)
to candidate WP_041098600.1 SUTH_RS08645 UTP--glucose-1-phosphate uridylyltransferase GalU

Query= BRENDA::Q8PK83
         (297 letters)



>NCBI__GCF_000828635.1:WP_041098600.1
          Length = 288

 Score =  313 bits (802), Expect = 3e-90
 Identities = 163/285 (57%), Positives = 202/285 (70%), Gaps = 1/285 (0%)

Query: 3   QRIRKAVFPVAGLGTRFLPATKTVPKEMLPIIDKPLIQYAVDEAIQAGCDTLIFVTNRYK 62
           +++ KAVFPVAG+GTRFLPATK  PKEM+PI+DKPLIQYAV+EA+ AG   +IFVT R K
Sbjct: 2   KKVTKAVFPVAGMGTRFLPATKASPKEMMPIVDKPLIQYAVEEAVAAGITDMIFVTGRSK 61

Query: 63  HSIADYFDKAYELEQKLERAGKLEQLELVRHALPDGVRAIFVTQAEALGLGHAVLCAKAV 122
            +I D+FDKAYELE +LE  GK E LE VR+ +P  +  I++ Q EALGLGHAVLCA   
Sbjct: 62  RAIEDHFDKAYELESELEHRGKTELLEFVRNMIPKNINCIYIRQPEALGLGHAVLCAYPA 121

Query: 123 VGNEPFAVLLPDDLMWNRGDAALTQMANVAEASGGSVIAVEDVPHDKTASYGIVSTDAFD 182
           VG+EPFAVLL DDL+ +     + QM +V E    SVI V+ VP   T SYGIV +    
Sbjct: 122 VGDEPFAVLLADDLL-DGTPPIMKQMVDVYEQQHSSVIGVQQVPRADTRSYGIVDSQPLA 180

Query: 183 GRKGRINAIVEKPKPEVAPSNLAVVGRYVLSPKIFDLLEATGAGAGGEIQLTDAIAELLK 242
               +I  IVEKPKPE APS LAVVGRY+L+P+IF  L   G G+GGEIQLTD IA LL 
Sbjct: 181 DSLEKILRIVEKPKPEEAPSTLAVVGRYILTPRIFHHLAHIGKGSGGEIQLTDGIAALLA 240

Query: 243 EEQVDAFRFEGRRFDCGAHIGLIEATVHFALEHEKHGGPAKEILR 287
           EEQV A+R++G R+DCG+ +G +EATV F L H + G     +L+
Sbjct: 241 EEQVLAYRYKGTRYDCGSKLGYLEATVAFGLRHPEVGQDFAALLK 285


Lambda     K      H
   0.319    0.137    0.393 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 270
Number of extensions: 5
Number of successful extensions: 2
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 297
Length of database: 288
Length adjustment: 26
Effective length of query: 271
Effective length of database: 262
Effective search space:    71002
Effective search space used:    71002
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 48 (23.1 bits)

Align candidate WP_041098600.1 SUTH_RS08645 (UTP--glucose-1-phosphate uridylyltransferase GalU)
to HMM TIGR01099 (galU: UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.9))

Software error:

../bin/blast/fastacmd -i /tmp/list.8398.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.8398.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.

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