Align Acetyl-coenzyme A synthetase; AcCoA synthetase; Acs; Acetate--CoA ligase; Acyl-activating enzyme; EC 6.2.1.1 (characterized)
to candidate WP_041099385.1 SUTH_RS11485 acetate--CoA ligase
Query= SwissProt::P31638
(660 letters)
>NCBI__GCF_000828635.1:WP_041099385.1
Length = 660
Score = 1060 bits (2740), Expect = 0.0
Identities = 506/658 (76%), Positives = 569/658 (86%)
Query: 1 MSAIESVMQEHRVFNPPEGFASQAAIPSMEAYQALCDEAERDYEGFWARHARELLHWTKP 60
MS+IES + E RVF P + +A I M AY+ALC EA++DY GFWAR ARE + W +P
Sbjct: 1 MSSIESNVTETRVFPPADAVVKKATISGMAAYEALCKEADQDYAGFWARLAREHVSWKQP 60
Query: 61 FTKVLDQSNAPFYKWFEDGELNASYNCLDRNLQNGNADKVAIVFEADDGSVTRVTYRELH 120
FTK LD+S APFY+WF DG+LN SYNCLDRN++ G DKVAI+FEAD G V+++TY+EL
Sbjct: 61 FTKSLDESKAPFYEWFADGKLNVSYNCLDRNIEAGLGDKVAIIFEADGGQVSKITYKELL 120
Query: 121 GKVCRFANGLKALGIRKGDRVVIYMPMSVEGVVAMQACARLGATHSVVFGGFSAKSLQER 180
+V RFAN LKA GI+KGDRV+IYMPMSVEGVVAMQACAR+GA HSVVFGGFSAKS+QER
Sbjct: 121 VRVARFANALKAQGIKKGDRVLIYMPMSVEGVVAMQACARIGAIHSVVFGGFSAKSVQER 180
Query: 181 LVDVGAVALITADEQMRGGKALPLKAIADDALALGGCEAVRNVIVYRRTGGKVAWTEGRD 240
+ D GAVA+IT+DEQ RGGK +PLK DD +A+GGCE+++ VIV++RTGG GRD
Sbjct: 181 IQDAGAVAVITSDEQCRGGKNIPLKPAVDDGIAMGGCESIKTVIVFKRTGGPCNMVAGRD 240
Query: 241 RWMEDVSAGQPDTCEAEPVSAEHPLFVLYTSGSTGKPKGVQHSTGGYLLWALMTMKWTFD 300
W ED +AGQ D CE E V AEHPLF+LYTSGSTGKPKGVQHS+GGYLL A++TMKWTFD
Sbjct: 241 IWWEDATAGQSDVCEPEWVGAEHPLFLLYTSGSTGKPKGVQHSSGGYLLHAILTMKWTFD 300
Query: 301 IKPDDLFWCTADIGWVTGHTYIAYGPLAAGATQVVFEGVPTYPNAGRFWDMIARHKVSIF 360
IKPDD+FWCTADIGWVTGHTYI YGPLA GAT++VFEGVPTYP+AGRFW I +HKV+IF
Sbjct: 301 IKPDDVFWCTADIGWVTGHTYITYGPLACGATEIVFEGVPTYPDAGRFWKTIEKHKVNIF 360
Query: 361 YTAPTAIRSLIKAAEADEKIHPKQYDLSSLRLLGTVGEPINPEAWMWYYKNIGNERCPIV 420
YTAPTAIRSLIKA E HPK +DLSSLR+LG+VGEPINPEAWMWYY N+G RCPIV
Sbjct: 361 YTAPTAIRSLIKAGENAPTTHPKNFDLSSLRILGSVGEPINPEAWMWYYNNVGGARCPIV 420
Query: 421 DTFWQTETGGHMITPLPGATPLVPGSCTLPLPGIMAAIVDETGHDVPNGNGGILVVKRPW 480
DTFWQTETGGHMITPLPGATPLVPGSCTLP PGI AAIVDETG+DV G GG LVVK+PW
Sbjct: 421 DTFWQTETGGHMITPLPGATPLVPGSCTLPFPGIAAAIVDETGNDVEWGKGGFLVVKKPW 480
Query: 481 PAMIRTIWGDPERFRKSYFPEELGGKLYLAGDGSIRDKDTGYFTIMGRIDDVLNVSGHRM 540
PAMIRTI+GDPER++KSYFP + GG LYLAGDG++RD TGYFTIMGRIDDVLNVSGHRM
Sbjct: 481 PAMIRTIYGDPERYKKSYFPVDFGGNLYLAGDGAMRDAKTGYFTIMGRIDDVLNVSGHRM 540
Query: 541 GTMEIESALVSNPLVAEAAVVGRPDDMTGEAICAFVVLKRSRPTGEEAVKIATELRNWVG 600
GTMEIESALVSNPLVAEAAVVGRPDD+TGEAICAFVVLK++RPT EEA KIA ELRNWVG
Sbjct: 541 GTMEIESALVSNPLVAEAAVVGRPDDLTGEAICAFVVLKQARPTAEEAKKIANELRNWVG 600
Query: 601 KEIGPIAKPKDIRFGDNLPKTRSGKIMRRLLRSLAKGEEITQDTSTLENPAILEQLKQ 658
KEIGPIAKPKDIRFG+NLPKTRSGKIMRRLLRSLAKGEEITQD STLENP IL+QLKQ
Sbjct: 601 KEIGPIAKPKDIRFGENLPKTRSGKIMRRLLRSLAKGEEITQDVSTLENPGILDQLKQ 658
Lambda K H
0.319 0.136 0.422
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 1546
Number of extensions: 63
Number of successful extensions: 1
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 660
Length of database: 660
Length adjustment: 38
Effective length of query: 622
Effective length of database: 622
Effective search space: 386884
Effective search space used: 386884
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 54 (25.4 bits)
Align candidate WP_041099385.1 SUTH_RS11485 (acetate--CoA ligase)
to HMM TIGR02188 (acs: acetate--CoA ligase (EC 6.2.1.1))
../bin/blast/fastacmd -i /tmp/list.24858.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.24858.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.
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