Align phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) (characterized)
to candidate WP_041376972.1 PNAP_RS03480 phosphoribosyl-ATP diphosphatase
Query= reanno::BFirm:BPHYT_RS17670
(131 letters)
>NCBI__GCF_000015505.1:WP_041376972.1
Length = 126
Score = 157 bits (397), Expect = 5e-44
Identities = 84/125 (67%), Positives = 97/125 (77%), Gaps = 7/125 (5%)
Query: 14 STTDTLMRLAAIIDSRK---GGDPDVSYVSRLFHKGDDAVLKKIGEEATEVVLAAKDARH 70
++ DTL RLA+II+SRK GGDP+ SYV+RL HKG DA LKKIGEEATE V+AAKD H
Sbjct: 2 NSNDTLERLASIIESRKPGHGGDPEKSYVARLLHKGPDAFLKKIGEEATETVMAAKDIDH 61
Query: 71 GGAPKAL----VGEVADLWFHCLVMLSHFDLSPADVLAELERREGMSGIEEKALRKSRDR 126
GG L VGEVADLWFH L+ L+H++L PADVLAELERREG SGIEEKALRK++ R
Sbjct: 62 GGPTPELNGKLVGEVADLWFHSLIALAHYNLRPADVLAELERREGTSGIEEKALRKAQHR 121
Query: 127 EQNGD 131
E D
Sbjct: 122 EAIND 126
Lambda K H
0.313 0.129 0.359
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 92
Number of extensions: 6
Number of successful extensions: 3
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 131
Length of database: 126
Length adjustment: 14
Effective length of query: 117
Effective length of database: 112
Effective search space: 13104
Effective search space used: 13104
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.5 bits)
S2: 41 (20.4 bits)
Align candidate WP_041376972.1 PNAP_RS03480 (phosphoribosyl-ATP diphosphatase)
to HMM TIGR03188 (hisE: phosphoribosyl-ATP diphosphatase (EC 3.6.1.31))
../bin/blast/fastacmd -i /tmp/list.17128.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.17128.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.
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