Align acetolactate synthase (subunit 1/2) (EC 2.2.1.6) (characterized)
to candidate WP_041551064.1 SARO_RS11380 acetolactate synthase small subunit
Query= BRENDA::P00894
(163 letters)
>NCBI__GCF_000013325.1:WP_041551064.1
Length = 171
Score = 129 bits (324), Expect = 2e-35
Identities = 66/159 (41%), Positives = 109/159 (68%), Gaps = 3/159 (1%)
Query: 2 RRILSVLLENESGALSRVIGLFSQRGYNIESLTVAP-TDDPTLSRMTIQTVGDEKVLEQI 60
R +L++ ++NE+G L+++ GLF+ RGYNI+SLTVA TD +SR+TI T G +++QI
Sbjct: 10 RHVLTITVDNEAGILAKIAGLFTARGYNIDSLTVADITDGHDVSRITIVTHGPPPIIDQI 69
Query: 61 EKQLHKLVDVLRVSELGQ-GAHVEREIMLVKIQASGYGRDEVKRNTEIFRGQIIDVTPSL 119
QL +LV V +V++L + G VERE+ L+K+ G R E R ++FR +++D T S
Sbjct: 70 RAQLERLVPVHKVTDLTEVGPFVERELALIKVSGKGENRVEALRLADVFRAKVVDTTTSS 129
Query: 120 YTVQLAGTSGKLDAFLASIRDVAKIVEVARSGVVGLSRG 158
+ +L G K+D+F++ ++++ +VEV R+G+VG+ RG
Sbjct: 130 FIFELTGAPDKIDSFVSLMKELG-LVEVGRTGIVGMIRG 167
Lambda K H
0.318 0.136 0.360
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 79
Number of extensions: 5
Number of successful extensions: 4
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 163
Length of database: 171
Length adjustment: 18
Effective length of query: 145
Effective length of database: 153
Effective search space: 22185
Effective search space used: 22185
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 43 (21.2 bits)
Align candidate WP_041551064.1 SARO_RS11380 (acetolactate synthase small subunit)
to HMM TIGR00119 (ilvN: acetolactate synthase, small subunit (EC 2.2.1.6))
../bin/blast/fastacmd -i /tmp/list.32462.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.32462.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.
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