Align phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) (characterized)
to candidate WP_043767034.1 U743_RS07685 phosphoribosyl-AMP cyclohydrolase
Query= BRENDA::Q8YH95
(139 letters)
>NCBI__GCF_000733765.1:WP_043767034.1
Length = 158
Score = 139 bits (351), Expect = 1e-38
Identities = 73/127 (57%), Positives = 87/127 (68%), Gaps = 2/127 (1%)
Query: 14 VEEGAAFMPRFDASGLITAIVTDARDGELLMVAHMNEEALRLTLETGIAHYWSRSRKTLW 73
VEEG PRFD GLI I T GE+LM+ +MNEEALR T+ TG AHYWSRSR+ LW
Sbjct: 16 VEEGNELAPRFDEHGLIPCITTAYGTGEVLMLGYMNEEALRQTIATGEAHYWSRSRQVLW 75
Query: 74 KKGETSGNLQSVVELRTDCDQDALWLKVHVAGDGPTCHTGRRSCFYRQV-VSSGGKVALT 132
KG TSG +Q+V ELR D DQDA+WL+V VAGD +CH G RSCFYR V V GG+
Sbjct: 76 HKGATSGLVQTVEELRIDDDQDAIWLRVSVAGDA-SCHVGYRSCFYRAVPVGEGGEERPL 134
Query: 133 MASDHDQ 139
+H++
Sbjct: 135 EFREHEK 141
Lambda K H
0.318 0.131 0.396
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 94
Number of extensions: 4
Number of successful extensions: 2
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 139
Length of database: 158
Length adjustment: 16
Effective length of query: 123
Effective length of database: 142
Effective search space: 17466
Effective search space used: 17466
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 42 (20.8 bits)
Align candidate WP_043767034.1 U743_RS07685 (phosphoribosyl-AMP cyclohydrolase)
to HMM PF01502 (PRA-CH)
../bin/blast/fastacmd -i /tmp/list.8136.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.8136.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.
For help, please send mail to the webmaster (help@microbesonline.org), giving this error message and the time and date of the error.