Alignments for a candidate for trpD_1 in Algiphilus aromaticivorans DG1253

Align anthranilate synthase (subunit 2/2) (EC 4.1.3.27) (characterized)
to candidate WP_043772115.1 U743_RS12665 aminodeoxychorismate/anthranilate synthase component II

Query= BRENDA::P20576
         (201 letters)



>NCBI__GCF_000733765.1:WP_043772115.1
          Length = 198

 Score =  286 bits (732), Expect = 2e-82
 Identities = 133/190 (70%), Positives = 161/190 (84%)

Query: 1   MLLMIDNYDSFTYNLVQYFGELKAEVKVVRNDELSVEQIEALAPERIVLSPGPCTPNEAG 60
           M+L++DNYDSFTYNLVQY GE+ A+V+VVRND +SV+++ A  P+ I+LSPGPCTPNEAG
Sbjct: 1   MVLVVDNYDSFTYNLVQYLGEIGAQVEVVRNDAMSVDEMLARQPDHILLSPGPCTPNEAG 60

Query: 61  VSLAVIERFAGKLPLLGVCLGHQSIGQAFGGEVVRARQVMHGKTSPIHHKDLGVFAGLAN 120
           V L +IER AG +P+ GVCLGHQ+IGQ FGGEVVRAR+VMHGKTS IHH  +GVFAGL +
Sbjct: 61  VCLELIERAAGHIPIFGVCLGHQAIGQVFGGEVVRAREVMHGKTSAIHHTGVGVFAGLES 120

Query: 121 PLTVTRYHSLVVKRESLPECLEVTAWTQHADGSLDEIMGVRHKTLNVEGVQFHPESILTE 180
           PLT TRYHSL+V R+SLP+CLE+TAWT  ADG +DE+MG RH+ L VEGVQFHPESIL+E
Sbjct: 121 PLTATRYHSLIVARDSLPDCLELTAWTATADGGVDEVMGFRHRELAVEGVQFHPESILSE 180

Query: 181 QGHELLANFL 190
            GH +L  FL
Sbjct: 181 HGHAMLRTFL 190


Lambda     K      H
   0.319    0.137    0.403 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 188
Number of extensions: 3
Number of successful extensions: 1
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 201
Length of database: 198
Length adjustment: 21
Effective length of query: 180
Effective length of database: 177
Effective search space:    31860
Effective search space used:    31860
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 45 (21.9 bits)

Align candidate WP_043772115.1 U743_RS12665 (aminodeoxychorismate/anthranilate synthase component II)
to HMM TIGR00566 (glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase)

Software error:

../bin/blast/fastacmd -i /tmp/list.22257.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.22257.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.

For help, please send mail to the webmaster (help@microbesonline.org), giving this error message and the time and date of the error.