Alignments for a candidate for trpD_1 in Oleispira antarctica

Align Anthranilate synthase component 2; AS; ASII; Anthranilate synthase, GATase component; Anthranilate synthase, glutamine amidotransferase component; EC 4.1.3.27 (characterized)
to candidate WP_046007841.1 OLEAN_RS02025 aminodeoxychorismate/anthranilate synthase component II

Query= SwissProt::P00901
         (198 letters)



>NCBI__GCF_000967895.1:WP_046007841.1
          Length = 194

 Score =  320 bits (819), Expect = 1e-92
 Identities = 147/193 (76%), Positives = 173/193 (89%)

Query: 2   LLMMIDNYDSFTYNVVQYLGELGAEVKVIRNDEMTIAQIEALNPERIVVSPGPCTPSEAG 61
           +L+MIDNYDSFTYNVVQY  ELGA+V+V RNDE+TI QIEALNP+ +V+SPGPCTP EAG
Sbjct: 1   MLLMIDNYDSFTYNVVQYFAELGADVQVYRNDEITIEQIEALNPDHLVISPGPCTPKEAG 60

Query: 62  VSIEAILHFAGKLPILGVCLGHQSIGQAFGGDVVRARQVMHGKTSPVHHRDLGVFTGLNN 121
           +S+EAI HFAGKLPILG+CLGHQSIGQ FGG++VRA QVMHGKTSPV H D GVF GLNN
Sbjct: 61  ISVEAIRHFAGKLPILGICLGHQSIGQVFGGEIVRAGQVMHGKTSPVVHADQGVFKGLNN 120

Query: 122 PLTVTRYHSLVVKRETLPDCLEVTAWTAHEDGSVDEIMGLRHKTLNIEGVQFHPESILTE 181
           PL  TRYHSLV+ ++TLPDCLE+T+WT ++DGS++EIMG+RHK L+IEGVQFHPESILTE
Sbjct: 121 PLIATRYHSLVIDKKTLPDCLEITSWTENQDGSMEEIMGVRHKELDIEGVQFHPESILTE 180

Query: 182 QGHELFANFLKQT 194
           QGHEL  NFLK++
Sbjct: 181 QGHELLNNFLKRS 193


Lambda     K      H
   0.320    0.138    0.411 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 204
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 198
Length of database: 194
Length adjustment: 20
Effective length of query: 178
Effective length of database: 174
Effective search space:    30972
Effective search space used:    30972
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 45 (21.9 bits)

Align candidate WP_046007841.1 OLEAN_RS02025 (aminodeoxychorismate/anthranilate synthase component II)
to HMM TIGR00566 (glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase)

Software error:

../bin/blast/fastacmd -i /tmp/list.319.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.319.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.

For help, please send mail to the webmaster (help@microbesonline.org), giving this error message and the time and date of the error.