Alignments for a candidate for proB in Oleispira antarctica

Align glutamate 5-kinase (EC 2.7.2.11) (characterized)
to candidate WP_046007975.1 OLEAN_RS02850 glutamate 5-kinase

Query= BRENDA::P0A7B5
         (367 letters)



>NCBI__GCF_000967895.1:WP_046007975.1
          Length = 380

 Score =  278 bits (711), Expect = 2e-79
 Identities = 153/362 (42%), Positives = 221/362 (61%), Gaps = 2/362 (0%)

Query: 5   QTLVVKLGTSVLTGGSRRLNRAHIVELVRQCAQLHAAGHRIVIVTSGAIAAGREHLGYPE 64
           Q  V+K+G+++LT   + LNR  I   V Q A+L + G  +V+V+SG++A G   LG+  
Sbjct: 18  QRWVIKIGSALLTNDGKGLNRPGIQAWVDQIAELMSQGIEVVLVSSGSVAEGMSRLGWTS 77

Query: 65  LPATIASKQLLAAVGQSRLIQLWEQLFSIYGIHVGQMLLTRADMEDRERFLNARDTLRAL 124
            P+ +   Q  AAVGQ  L+Q +E  F  +  H  Q+LLT AD+ +R+R+LNAR TLR L
Sbjct: 78  RPSEVHHLQAAAAVGQMGLVQAYETAFQHHNKHTAQILLTHADLSNRQRYLNARSTLRTL 137

Query: 125 LDNNIVPVINENDAVATAEIKVGDNDNLSALAAILAGADKLLLLTDQKGLYTADPRSNPQ 184
           ++  +VP++NEND V T EI+ GDND L AL A L  AD L++LTDQ GL+T DPR N  
Sbjct: 138 IEMGVVPIVNENDTVITDEIRFGDNDTLGALVANLVEADTLVILTDQDGLFTKDPRHNTD 197

Query: 185 AELIKDVYGIDDALRAIAGDSVSGLGTGGMSTKLQAADVACRAGIDTIIAAGSKPGVIGD 244
           AELI +    D +  A+AGD+   LG GGM TK++AA VA R+G DT+I  G    V+  
Sbjct: 198 AELITEGRASDASFAAMAGDA-GALGRGGMITKVKAAVVAARSGADTVIVGGRIENVLIR 256

Query: 245 VMEGISVGTLFHAQATPLENRKRWIFG-APPAGEITVDEGATAAILERGSSLLPKGIKSV 303
           +     +GTL  A   P   RK+WI G     GE+ +D+GA  A+ + G+SLLP G+K+V
Sbjct: 257 LRAKEKIGTLLVADTAPEVARKQWIAGHLQHCGELILDDGAVKALEKGGNSLLPVGVKAV 316

Query: 304 TGNFSRGEVIRICNLEGRDIAHGVSRYNSDALRRIAGHHSQEIDAILGYEYGPVAVHRDD 363
            G F RGEV+   N +G+ IA G+  ++    +++ G  S +   +LGY      +H D+
Sbjct: 317 KGIFRRGEVVACLNSKGKIIAKGLINFDHSEAQKLCGKTSAQQQELLGYVGEEELIHIDN 376

Query: 364 MI 365
           ++
Sbjct: 377 LV 378


Lambda     K      H
   0.318    0.135    0.384 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 347
Number of extensions: 15
Number of successful extensions: 3
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 367
Length of database: 380
Length adjustment: 30
Effective length of query: 337
Effective length of database: 350
Effective search space:   117950
Effective search space used:   117950
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 50 (23.9 bits)

Align candidate WP_046007975.1 OLEAN_RS02850 (glutamate 5-kinase)
to HMM TIGR01027 (proB: glutamate 5-kinase (EC 2.7.2.11))

Software error:

../bin/blast/fastacmd -i /tmp/list.19976.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.19976.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.

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