Alignments for a candidate for argI in Oleispira antarctica

Align Ornithine carbamoyltransferase 1, anabolic; OTCase 1; Ornithine carbamoyltransferase 1, phaseolotoxin-sensitive; SOCT; EC 2.1.3.3 (characterized)
to candidate WP_046008543.1 OLEAN_RS06400 ornithine carbamoyltransferase

Query= SwissProt::Q02047
         (306 letters)



>NCBI__GCF_000967895.1:WP_046008543.1
          Length = 302

 Score =  411 bits (1056), Expect = e-119
 Identities = 197/297 (66%), Positives = 240/297 (80%)

Query: 3   ARHFLSMMDYTPDELLGLIRRGVELKDLRIRGELFEPLKNRVLGMIFEKSSTRTRLSFEA 62
           ARHFL+++D  P EL  +I R +ELK ++  GE++EPLKN+VLGMIFEKSSTRTR+SFEA
Sbjct: 2   ARHFLTLLDLEPAELDWVINRAIELKKMQHAGEIYEPLKNQVLGMIFEKSSTRTRISFEA 61

Query: 63  GMIQLGGQAIFLSHRDTQLGRGEPIADSAKVMSRMLDAVMIRTYAHSNLTEFAANSRVPV 122
           GM Q GG AIFLS RDTQLGRGEPI DSA+VMSRM+DA+MIRT+ H  + +FAA S+VPV
Sbjct: 62  GMTQFGGSAIFLSSRDTQLGRGEPIEDSARVMSRMVDAIMIRTFDHEIVEKFAAYSKVPV 121

Query: 123 INGLSDDLHPCQLLADMQTFLEHRGSIKGKTVAWIGDGNNMCNSYIEAAIQFDFQLRVAC 182
           IN L+DD HPCQLLADMQT+ EHRGSIKGKTV W+GDGNNMC+SYI AA QFDF+L +AC
Sbjct: 122 INALTDDFHPCQLLADMQTYKEHRGSIKGKTVTWVGDGNNMCHSYINAARQFDFKLNIAC 181

Query: 183 PAGYEPNPEFLALAGERVTIVRDPKAAVAGAHLVSTDVWTSMGQEEETARRMALFAPFQV 242
           P G++P+ + +    +RV I+R+PK AV  + L+ TDVW SMGQEEE   RM  FA +QV
Sbjct: 182 PEGFDPHHQLVDDNADRVQIIRNPKEAVINSDLIVTDVWASMGQEEEQQARMVKFADYQV 241

Query: 243 TRASLDLAEKDVLFMHCLPAHRGEEISVDLLDDSRSVAWDQAENRLHAQKALLEFLV 299
            +  +DLA  D LFMHCLPAHRGEE+S +++DD  SV WD+AENRLHAQKALLEFL+
Sbjct: 242 NKELMDLANPDALFMHCLPAHRGEEVSAEVMDDLDSVVWDEAENRLHAQKALLEFLM 298


Lambda     K      H
   0.322    0.135    0.397 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 314
Number of extensions: 4
Number of successful extensions: 1
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 306
Length of database: 302
Length adjustment: 27
Effective length of query: 279
Effective length of database: 275
Effective search space:    76725
Effective search space used:    76725
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 48 (23.1 bits)

Align candidate WP_046008543.1 OLEAN_RS06400 (ornithine carbamoyltransferase)
to HMM TIGR00658 (argF: ornithine carbamoyltransferase (EC 2.1.3.3))

Software error:

../bin/blast/fastacmd -i /tmp/list.25500.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.25500.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.

For help, please send mail to the webmaster (help@microbesonline.org), giving this error message and the time and date of the error.