Align Phosphoribosyl-AMP cyclohydrolase; PRA-CH; EC 3.5.4.19 (characterized)
to candidate WP_048061191.1 MTH_RS01120 phosphoribosyl-AMP cyclohydrolase
Query= SwissProt::O26347
(138 letters)
>NCBI__GCF_000008645.1:WP_048061191.1
Length = 129
Score = 266 bits (680), Expect = 8e-77
Identities = 128/129 (99%), Positives = 129/129 (100%)
Query: 10 ILLNFRHNINGEDLIIAVAQDHETGEVLMVAYMNREALRRTLETGTAHYWSTSRGKLWLK 69
+LLNFRHNINGEDLIIAVAQDHETGEVLMVAYMNREALRRTLETGTAHYWSTSRGKLWLK
Sbjct: 1 MLLNFRHNINGEDLIIAVAQDHETGEVLMVAYMNREALRRTLETGTAHYWSTSRGKLWLK 60
Query: 70 GESSGHVQRVKDVLVDCDGDAVVLKVEQEGGACHTGYRSCFYRSIDGDELKVREDAVKVF 129
GESSGHVQRVKDVLVDCDGDAVVLKVEQEGGACHTGYRSCFYRSIDGDELKVREDAVKVF
Sbjct: 61 GESSGHVQRVKDVLVDCDGDAVVLKVEQEGGACHTGYRSCFYRSIDGDELKVREDAVKVF 120
Query: 130 DPEEIYGDG 138
DPEEIYGDG
Sbjct: 121 DPEEIYGDG 129
Lambda K H
0.318 0.137 0.410
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 160
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 138
Length of database: 129
Length adjustment: 15
Effective length of query: 123
Effective length of database: 114
Effective search space: 14022
Effective search space used: 14022
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 42 (20.8 bits)
Align candidate WP_048061191.1 MTH_RS01120 (phosphoribosyl-AMP cyclohydrolase)
to HMM PF01502 (PRA-CH)
../bin/blast/fastacmd -i /tmp/list.5260.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.5260.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.
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