Align S-sulfo-L-cysteine synthase (O-acetyl-L-serine-dependent) (EC 2.5.1.144); cysteine synthase (EC 2.5.1.47) (characterized)
to candidate WP_050461457.1 AKL27_RS03870 cysteine synthase CysM
Query= BRENDA::P29848 (303 letters) >NCBI__GCF_001189915.1:WP_050461457.1 Length = 300 Score = 375 bits (962), Expect = e-109 Identities = 184/294 (62%), Positives = 230/294 (78%), Gaps = 4/294 (1%) Query: 3 TLEQTIGNTPLVKLQRLGPDNGSE----IWVKLEGNNPAGSVKDRAALSMIVEAEKRGEI 58 T+E+TIGNTPL++LQR+G ++ I K+EGNNPAGSVKDRAALSMI AE+RG+I Sbjct: 5 TIEETIGNTPLIQLQRIGGEDAVRRNNIILGKMEGNNPAGSVKDRAALSMIRRAEERGQI 64 Query: 59 KPGDVLIEATSGNTGIALAMIAALKGYRMKLLMPDNMSQERRAAMRAYGAELILVTKEQG 118 KPGD LIEATSGNTGIALAM+AA++GY+M LLMP+N+S+ERR +M AYGA+++L K G Sbjct: 65 KPGDTLIEATSGNTGIALAMVAAMRGYKMVLLMPENLSEERRQSMAAYGAKIVLTPKSGG 124 Query: 119 MEGARDLALAMSERGEGKLLDQFNNPDNPYAHYTTTGPEIWRQTSGRITHFVSSMGTTGT 178 ME ARDLA M + G+G +LDQF N DNP AHY TTGPE+WR T G ITHFVS+MGTTGT Sbjct: 125 MEYARDLAEQMQKEGQGLILDQFANADNPLAHYETTGPELWRDTKGGITHFVSAMGTTGT 184 Query: 179 ITGVSRFLREQEKPVTIVGLQPEEGSSIPGIRRWPAEYMPGIFNASLVDEVLDIHQNDAE 238 I GVSR+L+EQ + IVG QPEEGSSIPGIR+WP Y+P I+ VD++ + Q AE Sbjct: 185 IMGVSRYLKEQNPAIQIVGAQPEEGSSIPGIRKWPEAYLPKIYEKPRVDQLEYVSQAAAE 244 Query: 239 NTMRELAVREGIFCGVSSGGAVAGALRVARATPGAIVVAIICDRGDRYLSTGVF 292 N R+LA+ EG+FCG+S+ GA ALR+++ A +V ++CDRGDRYLSTGVF Sbjct: 245 NMARKLAMVEGLFCGISAAGACEVALRISQQVENATIVFVVCDRGDRYLSTGVF 298 Lambda K H 0.316 0.134 0.386 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 1 Number of Hits to DB: 344 Number of extensions: 11 Number of successful extensions: 2 Number of sequences better than 1.0e-02: 1 Number of HSP's gapped: 1 Number of HSP's successfully gapped: 1 Length of query: 303 Length of database: 300 Length adjustment: 27 Effective length of query: 276 Effective length of database: 273 Effective search space: 75348 Effective search space used: 75348 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 48 (23.1 bits)
Align candidate WP_050461457.1 AKL27_RS03870 (cysteine synthase CysM)
to HMM TIGR01138 (cysM: cysteine synthase B (EC 2.5.1.47))
../bin/blast/fastacmd -i /tmp/list.15729.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.15729.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.
For help, please send mail to the webmaster (help@microbesonline.org), giving this error message and the time and date of the error.