Align ketol-acid reductoisomerase (NADP+) (EC 1.1.1.86) (characterized)
to candidate WP_053767938.1 BVI061214_RS07980 ketol-acid reductoisomerase
Query= BRENDA::D3PT81
(339 letters)
>NCBI__GCF_001280255.1:WP_053767938.1
Length = 337
Score = 533 bits (1373), Expect = e-156
Identities = 263/338 (77%), Positives = 290/338 (85%), Gaps = 1/338 (0%)
Query: 1 MKIYYDQDADIGFIKDKTVAILGFGSQGHAHALNLRDSGIKVVVGLRPGSRNEEKARKAG 60
MK+YY+ DAD+GF+ K VA+LGFGSQGHAHALNL+DSG+ V VGLRPGSR+ KA AG
Sbjct: 1 MKVYYEHDADLGFLSGKKVAVLGFGSQGHAHALNLKDSGVDVRVGLRPGSRSWAKAEGAG 60
Query: 61 LEVLPVGEAVRRADVVMILLPDETQGAVYKAEVEPNLKEGAALAFAHGFNIHFGQIKPRR 120
L VLP EAV AD+VM+LLPDE Q AVY+ ++EP+LKEG ALAFAHGFNIHF QIKPR+
Sbjct: 61 LRVLPTPEAVAEADIVMVLLPDELQAAVYRQDIEPHLKEGGALAFAHGFNIHFSQIKPRK 120
Query: 121 DLDVWMVAPKGPGHLVRSEYEKGSGVPSLVAVYQDASGSAFPTALAYAKANGGTRAGTIA 180
DLDVWMVAPKGPGHLVRSEY KGSGVP+LVAV+QDASGSAFPTALAYAKA G RAG I
Sbjct: 121 DLDVWMVAPKGPGHLVRSEYVKGSGVPALVAVHQDASGSAFPTALAYAKAIGSARAGVIP 180
Query: 181 TTFKDETETDLFGEQTVLCGGLTQLIAAGFETLVEAGYPPEMAYFECLHEVKLIVDLIYE 240
TTFKDETETDLFGEQ VLCGGLT+LI AGFETLVEAGYPPEMAYFE +HEVKLIVDLIYE
Sbjct: 181 TTFKDETETDLFGEQAVLCGGLTRLIQAGFETLVEAGYPPEMAYFETVHEVKLIVDLIYE 240
Query: 241 SGFAGMRYSISNTAEYGDYTRGPMVINREETKARMREVLRQIQQGEFAREWMLENVVGQP 300
+G +GMRYSISNTAEYGDYTRG + + EETK RMRE+LRQIQ GEFAREWMLEN GQP
Sbjct: 241 AGLSGMRYSISNTAEYGDYTRGDLSVPVEETKRRMREILRQIQTGEFAREWMLENQAGQP 300
Query: 301 TLNANRNYWKDHPIEQVGPKLRAMMPFLKSRFTKEEVG 338
L A R WK HPIE+VG +LRAMMPFLK+R EEVG
Sbjct: 301 VLEAGRKRWKAHPIEEVGARLRAMMPFLKAR-VLEEVG 337
Lambda K H
0.318 0.136 0.398
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 478
Number of extensions: 10
Number of successful extensions: 1
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 339
Length of database: 337
Length adjustment: 28
Effective length of query: 311
Effective length of database: 309
Effective search space: 96099
Effective search space used: 96099
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 49 (23.5 bits)
Align candidate WP_053767938.1 BVI061214_RS07980 (ketol-acid reductoisomerase)
to HMM TIGR00465 (ilvC: ketol-acid reductoisomerase (EC 1.1.1.86))
../bin/blast/fastacmd -i /tmp/list.1210.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.1210.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.
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