Alignments for a candidate for hutI in Stenotrophomonas chelatiphaga DSM 21508

Align Imidazolonepropionase (EC 3.5.2.7) (characterized)
to candidate WP_057506767.1 ABB28_RS00625 imidazolonepropionase

Query= reanno::Korea:Ga0059261_3964
         (395 letters)



>NCBI__GCF_001431535.1:WP_057506767.1
          Length = 401

 Score =  460 bits (1184), Expect = e-134
 Identities = 245/395 (62%), Positives = 286/395 (72%), Gaps = 8/395 (2%)

Query: 6   DTLWRNARLATMTGDGLGIVEQGAIAATGGTISYIGPDSDAPDA--AEIVDCQGRWITPG 63
           DTLW N  L T+ GDGLG++    +A+  G I ++G          A  +D +GRWI+PG
Sbjct: 4   DTLWTNVHLMTLQGDGLGVIADAELASLDGRIVHVGAAGSGAQLQPATRIDGEGRWISPG 63

Query: 64  LVDCHTHLVHAGNRAREFEARLEGATYEEIARAGGGILSTVTATRAASEDELIASALPRL 123
           L+DCHTHLV+AGNRA EFE RL+G +Y +IARAGGGI+STV ATRAAS  EL+  + PRL
Sbjct: 64  LIDCHTHLVYAGNRANEFEQRLQGVSYADIARAGGGIVSTVRATRAASHAELVRQSRPRL 123

Query: 124 DQLIAEGVTTVEIKSGYGLTLDDELKMLRAARSLGEARNVHIRTTLLAAHAVPPEYKGDA 183
             + AEG+TT+EIKSGYGL LDDE K L+ AR LG   NVH+  T L AHAVPP  +  A
Sbjct: 124 LAMRAEGITTLEIKSGYGLALDDERKQLQVARQLGVDCNVHVVPTFLGAHAVPPGRQ--A 181

Query: 184 DGYVDLVCETIIPA--AIGHADAVDAFCEGIGFSPEQTDRVLAAAVAHGLPVKLHAEQLS 241
             Y+D VC+ +IPA  A G A+AVD FCE I FS  Q  +V  AA AHGL VK+HAEQLS
Sbjct: 182 QEYIDEVCKLMIPAIAAEGLAEAVDIFCEDIAFSTAQAAQVFEAARAHGLAVKIHAEQLS 241

Query: 242 NLHGAALAAHHNALSADHLEHLDEAGIAAMAASGTVATLLPGAFYFTREEHRPPIAALRA 301
           N HGA LAA H ALSADH+EHLD AGIAAMAA+GTVA LLPGAFYFTR+   PPI ALRA
Sbjct: 242 NQHGAELAARHGALSADHIEHLDAAGIAAMAAAGTVAVLLPGAFYFTRDTTLPPIEALRA 301

Query: 302 AGVPIALATDCNPGTSPMASILLAANMGATFFRLTVTECLRGITVNGARALGL--RTGTL 359
           AGVP+ALATD NPGTSP+ S LLA NMGAT FRLTV EC+ G T N ARALG   R G L
Sbjct: 302 AGVPLALATDSNPGTSPLTSPLLAMNMGATLFRLTVDECIAGFTRNAARALGRADRIGQL 361

Query: 360 EPGGPADLAIWNVTDLAELVYRIGANPLHSRIYAG 394
             G  ADLAIW++   A+LVYRIG NPLH+R+  G
Sbjct: 362 AVGMDADLAIWDIDAPADLVYRIGFNPLHARVVRG 396


Lambda     K      H
   0.318    0.134    0.396 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 510
Number of extensions: 26
Number of successful extensions: 5
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 395
Length of database: 401
Length adjustment: 31
Effective length of query: 364
Effective length of database: 370
Effective search space:   134680
Effective search space used:   134680
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 50 (23.9 bits)

Align candidate WP_057506767.1 ABB28_RS00625 (imidazolonepropionase)
to HMM TIGR01224 (hutI: imidazolonepropionase (EC 3.5.2.7))

Software error:

../bin/blast/fastacmd -i /tmp/list.12476.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.12476.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.

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