Align arginosuccinate synthetase (EC 6.3.4.5) (characterized)
to candidate WP_057687253.1 ABB28_RS15385 argininosuccinate synthase
Query= reanno::Dyella79:N515DRAFT_3766
(398 letters)
>NCBI__GCF_001431535.1:WP_057687253.1
Length = 397
Score = 680 bits (1755), Expect = 0.0
Identities = 327/395 (82%), Positives = 363/395 (91%)
Query: 2 SKDIVLAFSGGLDTSFCVPYLKERGWNVHTVFADTGGVDAEERAYIEARAQELGVASHVT 61
+KD+VLAFSGGLDTSFCVPYL+ERG+NVHTVFADTGGVD EER +IE RA ELGV SHVT
Sbjct: 3 NKDVVLAFSGGLDTSFCVPYLQERGYNVHTVFADTGGVDDEERDFIEKRAAELGVTSHVT 62
Query: 62 VDGGPAIWNGFVKPFVWAGEGYQGQYPLLVSDRYLIVDAAIQRCAELGTRAIAHGCTGMG 121
VDGGPAIW GFVKPFVWAGEGYQGQYPLLVSDRYLIVDAA++R AELGT IAHGCTGMG
Sbjct: 63 VDGGPAIWEGFVKPFVWAGEGYQGQYPLLVSDRYLIVDAALKRAAELGTNIIAHGCTGMG 122
Query: 122 NDQVRFDLAVKALGDYEIVAPIREIQKEHTQTRAYEQAYLEERGFPVRAKQKSYTINENL 181
NDQVRFDLAVKALGDY+I+APIREIQKEHTQTRAYEQ YLEERGF VRAKQ++YTINENL
Sbjct: 123 NDQVRFDLAVKALGDYQIIAPIREIQKEHTQTRAYEQKYLEERGFGVRAKQQAYTINENL 182
Query: 182 LGVTLSGGEIDLWKAPGEGARGWCKPRAEWPSEKLSVTLGFEHGEAVSLNGEKLPGAKIL 241
LG+T+SGGEID W+APGEGARGWC PR+EWP + L+VTL F G AV L+G+ LPG KIL
Sbjct: 183 LGLTMSGGEIDRWEAPGEGARGWCAPRSEWPEQALTVTLKFVDGVAVELDGKALPGEKIL 242
Query: 242 ARLNELFAPYGVGRGMYTGDTTIGLKGRIVYEAPGLISLLAAHRALEEAVLTKQQNRFKP 301
A LN+LFAPYGVGRG+YTGDT IGLKGRIV+EAPGL+SLLAAHRALE+AVLTKQQNRFKP
Sbjct: 243 ATLNKLFAPYGVGRGVYTGDTVIGLKGRIVFEAPGLVSLLAAHRALEDAVLTKQQNRFKP 302
Query: 302 EIARKWVEVVYEGFFHDPVKTDLEAFLASSQQQVNGDVVLETSGAQVTAVEVRSPHILNA 361
++ARKWVE+VYEGF+HDP+KTD+EAFL SSQ +VNG+VVLET G +V AV VRSPH+LN
Sbjct: 303 DVARKWVELVYEGFYHDPLKTDIEAFLKSSQAKVNGEVVLETRGGRVDAVAVRSPHLLNT 362
Query: 362 KGATYAQSADWGVAEAEGFIKLFGMSSTLWAEVNR 396
KGATYAQSADWGV EAEGFIKLFGMSSTL+A+VNR
Sbjct: 363 KGATYAQSADWGVEEAEGFIKLFGMSSTLYAQVNR 397
Lambda K H
0.317 0.135 0.408
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 652
Number of extensions: 24
Number of successful extensions: 1
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 398
Length of database: 397
Length adjustment: 31
Effective length of query: 367
Effective length of database: 366
Effective search space: 134322
Effective search space used: 134322
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 50 (23.9 bits)
Align candidate WP_057687253.1 ABB28_RS15385 (argininosuccinate synthase)
to HMM TIGR00032 (argG: argininosuccinate synthase (EC 6.3.4.5))
../bin/blast/fastacmd -i /tmp/list.8445.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.8445.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.
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