Alignments for a candidate for ilvE in Pseudarthrobacter sulfonivorans Ar51

Align branched-chain-amino-acid transaminase (EC 2.6.1.42) (characterized)
to candidate WP_058932081.1 AU252_RS19160 branched-chain amino acid aminotransferase

Query= BRENDA::A0R066
         (368 letters)



>NCBI__GCF_001484605.1:WP_058932081.1
          Length = 370

 Score =  427 bits (1098), Expect = e-124
 Identities = 219/366 (59%), Positives = 265/366 (72%), Gaps = 8/366 (2%)

Query: 6   LEFTVSANTNPATDAVRESILANPGFGKYYTDHMVSIDYTVDE----GWHNAQVIPYGPI 61
           +EF    +  P +   R +ILANPGFG Y+TDH   +DY+VDE    GWHNA+V  YGPI
Sbjct: 8   VEFNQQLSATPKSAEERAAILANPGFGNYFTDHTAVVDYSVDEQGEGGWHNARVEAYGPI 67

Query: 62  QLDPSAIVLHYGQEIFEGLKAYRWADGSIVSFRPEANAARLQSSARRLAIPELPEEVFIE 121
            LDPSA VLHYGQEIFEGLKAYR ADGSI +FRPEANAARL  SARRLA+PELPEE F+ 
Sbjct: 68  SLDPSAAVLHYGQEIFEGLKAYRHADGSIWTFRPEANAARLNKSARRLALPELPEEYFLG 127

Query: 122 SLRQLIAVDEKWVPPAGGEESLYLRPFVIATEPGLGVRPSNEYRYLLIASPAGAYFKGGI 181
           ++R+L+  D++WVP AG  E+LYLRPF+IATE  LGVR + E  + +IASPAG YF G +
Sbjct: 128 AIRELVQADKEWVP-AGDGEALYLRPFMIATEAFLGVRAAREVSFRVIASPAGNYFGGEL 186

Query: 182 KPVSVWLSHEYVRASPGGTGAAKFGGNYAASLLAQAQAAEMGCDQVVWLDAIERRYVEEM 241
           KPVS+W+S EY RA  GGTGAAK GGNYAASL+AQ +A   GC QV++LD      VEE+
Sbjct: 187 KPVSIWISREYARAGRGGTGAAKCGGNYAASLIAQQEAEANGCKQVLFLDHFNDNAVEEL 246

Query: 242 GGMNLFFVFGSGGSARLVTPELSGSLLPGITRDSLLQLATDAGFAVEERKIDVDEWQKKA 301
           GGMN+FFV   G    LVTP LSG++L G+TR S++Q+A D G  V ERKI +DEW+   
Sbjct: 247 GGMNVFFVMKDGS---LVTPALSGTILEGVTRMSVIQVAKDMGREVAERKITLDEWRDGV 303

Query: 302 GAGEITEVFACGTAAVITPVSHVKHHDGEFTIADGQPGEITMALRDTLTGIQRGTFADTH 361
            +GEI EVFACGTAAVITP+  +K         D + GE TMA+R+ L GIQ GT  DTH
Sbjct: 304 ASGEIAEVFACGTAAVITPIGVLKDTTEFIGSEDAKAGETTMAIRERLLGIQTGTVPDTH 363

Query: 362 GWMARL 367
           GW+ RL
Sbjct: 364 GWLTRL 369


Lambda     K      H
   0.318    0.135    0.409 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 466
Number of extensions: 18
Number of successful extensions: 4
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 368
Length of database: 370
Length adjustment: 30
Effective length of query: 338
Effective length of database: 340
Effective search space:   114920
Effective search space used:   114920
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 49 (23.5 bits)

Align candidate WP_058932081.1 AU252_RS19160 (branched-chain amino acid aminotransferase)
to HMM TIGR01123 (ilvE: branched-chain amino acid aminotransferase (EC 2.6.1.42))

Software error:

../bin/blast/fastacmd -i /tmp/list.1801.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.1801.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.

For help, please send mail to the webmaster (help@microbesonline.org), giving this error message and the time and date of the error.