Align acetohydroxyacid synthase subunit B (EC 2.2.1.6) (characterized)
to candidate WP_068168649.1 HTA01S_RS07370 acetolactate synthase 3 catalytic subunit
Query= metacyc::MONOMER-18810
(585 letters)
>NCBI__GCF_001592305.1:WP_068168649.1
Length = 591
Score = 899 bits (2322), Expect = 0.0
Identities = 439/586 (74%), Positives = 503/586 (85%), Gaps = 4/586 (0%)
Query: 4 AEFSHADSNSSAAP-EMIGAEILVHALAEEGVEYVWGYPGGAVLYIYDELHKQTKFEHIL 62
AE + A + S AAP E+ GAEIL+ AL EGV+Y+WGYPGGAVL+IYD +KQ +H+L
Sbjct: 6 AELASAAAASGAAPQELRGAEILIKALQAEGVKYIWGYPGGAVLHIYDAFYKQDTIQHVL 65
Query: 63 VRHEQAAVHAADGYARATGKVGVALVTSGPGVTNAVTGIATAYLDSIPMVVITGNVPTHA 122
VRHEQAAVHAADGYARATG VGV+LVTSGPG+TNAVTGIATAY+DSIPMV+I G VPT A
Sbjct: 66 VRHEQAAVHAADGYARATGDVGVSLVTSGPGLTNAVTGIATAYMDSIPMVIIAGQVPTAA 125
Query: 123 IGQDAFQECDTVGITRPIVKHNFLVKDVRDLAATIKKAFFIAATGRPGPVVVDIPKDVSR 182
IG DAFQECDTVGITRPIVKHNFLVKDVRD+A +KKAF IA +GRPGPVVVDIPKDVS
Sbjct: 126 IGLDAFQECDTVGITRPIVKHNFLVKDVRDMAMVMKKAFHIARSGRPGPVVVDIPKDVSF 185
Query: 183 NACKYE-YPKSIDMRSYNPVNKGHSGQIRKAVALLQGAERPYIYTGGGVVLANASDELRQ 241
N Y YP+S+ MRSYNPV KGH GQIRKA+ LL A+RPYIYTGGGV+L NA ELR
Sbjct: 186 NKTAYTGYPESVSMRSYNPVRKGHGGQIRKALQLLLSAKRPYIYTGGGVLLGNAVQELRT 245
Query: 242 LAALTGHPVTNTLMGLGAFPGTSKQFVGMLGMHGTYEANMAMQNCDVLIAIGARFDDRVI 301
L + G+PVTNTLMGLGA+P T ++F+GMLGMHGT EAN AMQNCDVL+A+GARFDDRVI
Sbjct: 246 LVDMLGYPVTNTLMGLGAYPATDRKFLGMLGMHGTVEANNAMQNCDVLLAVGARFDDRVI 305
Query: 302 GNPAHFTSQARKIIHIDIDPSSISKRVKVDIPIVGNVKDVLQELIAQIKASDIKPKREAL 361
GNP HF RKIIHIDIDPSSISKRVKVD+PIVG+VKDVL ELI+ ++ S ++P +AL
Sbjct: 306 GNPKHFAQNERKIIHIDIDPSSISKRVKVDVPIVGDVKDVLTELISMVRESPLRPDEKAL 365
Query: 362 AKWWEQIEQWRSVDCLKYDRSS-EIIKPQYVVEKIWELTK-GDAFICSDVGQHQMWAAQF 419
A WWE IE WRS DCLKYDR + ++IKPQYVVE +W +TK DA+I SDVGQHQMWAAQ+
Sbjct: 366 AGWWEAIEGWRSTDCLKYDRGNKDVIKPQYVVETLWNMTKDADAYITSDVGQHQMWAAQY 425
Query: 420 YKFDEPRRWINSGGLGTMGVGLPYAMGIKKAFPEKEVVTITGEGSIQMCIQELSTCLQYD 479
YKF+EPRRWINSGGLGTMGVG+PYAMGIK A PE EV +TGEGS+QMCIQELSTCLQY+
Sbjct: 426 YKFNEPRRWINSGGLGTMGVGIPYAMGIKLAKPESEVFCVTGEGSVQMCIQELSTCLQYN 485
Query: 480 TPVKICSLNNGYLGMVRQWQEIEYDNRYSHSYMDALPDFVKLAEAYGHVGMRVEKTSDVE 539
TP+KI +LNN YLGMVRQWQE++Y+ RYSHSYMDALP+FVKLAEAYGHVGM +E+ DVE
Sbjct: 486 TPIKIMALNNRYLGMVRQWQELDYEGRYSHSYMDALPNFVKLAEAYGHVGMLIERPQDVE 545
Query: 540 PALREAFRLKDRTVFLDFQTDPTENVWPMVQAGKGISEMLLGAEDL 585
ALREA +LKDRTVF+DF+TDPTENV+PMV+AGKGI+EM LGAEDL
Sbjct: 546 GALREARKLKDRTVFMDFRTDPTENVFPMVRAGKGITEMTLGAEDL 591
Lambda K H
0.319 0.135 0.407
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 1110
Number of extensions: 32
Number of successful extensions: 4
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 585
Length of database: 591
Length adjustment: 37
Effective length of query: 548
Effective length of database: 554
Effective search space: 303592
Effective search space used: 303592
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (25.0 bits)
Align candidate WP_068168649.1 HTA01S_RS07370 (acetolactate synthase 3 catalytic subunit)
to HMM TIGR00118 (ilvB: acetolactate synthase, large subunit, biosynthetic type (EC 2.2.1.6))
../bin/blast/fastacmd -i /tmp/list.17372.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.17372.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.
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