Alignments for a candidate for argB in Sulfurivirga caldicuralii DSM 17737

Align acetylglutamate kinase (EC 2.7.2.8) (characterized)
to candidate WP_074200628.1 BUQ81_RS01510 acetylglutamate kinase

Query= BRENDA::Q9HTN2
         (301 letters)



>NCBI__GCF_900141795.1:WP_074200628.1
          Length = 303

 Score =  420 bits (1080), Expect = e-122
 Identities = 209/296 (70%), Positives = 249/296 (84%)

Query: 1   MTLSRDDAAQVAKVLSEALPYIRRFVGKTLVIKYGGNAMESEELKAGFARDVVLMKAVGI 60
           M ++++ A ++A VLSEALPYI+RF GKT+V+KYGGNAM  E+LK  FARD+VLMK VG+
Sbjct: 6   MKMTKERAGEIAAVLSEALPYIQRFAGKTIVVKYGGNAMVDEQLKHSFARDIVLMKLVGM 65

Query: 61  NPVVVHGGGPQIGDLLKRLSIESHFIDGMRVTDAATMDVVEMVLGGQVNKDIVNLINRHG 120
           NPVVVHGGGPQIG LL R+  ES FI GMRVTD  TMDVVEMVLGG VNK IVNLI+R+G
Sbjct: 66  NPVVVHGGGPQIGQLLARIGKESKFIAGMRVTDEETMDVVEMVLGGLVNKQIVNLIHRNG 125

Query: 121 GSAIGLTGKDAELIRAKKLTVTRQTPEMTKPEIIDIGHVGEVTGVNVGLLNMLVKGDFIP 180
           G+A+GLTGKD  LI A+ L + R  P++  PEIID+GHVGEV  VN  +L+MLV+ DFIP
Sbjct: 126 GNAVGLTGKDGNLITARPLKIKRMNPDLDAPEIIDLGHVGEVEKVNTRVLDMLVEDDFIP 185

Query: 181 VIAPIGVGSNGESYNINADLVAGKVAEALKAEKLMLLTNIAGLMDKQGQVLTGLSTEQVN 240
           VIAP+GVG +G SYNINADLVAGKVAEAL+AEKLMLLTN  GL+DK G +LTGL   +V 
Sbjct: 186 VIAPVGVGKDGASYNINADLVAGKVAEALQAEKLMLLTNTPGLLDKAGNLLTGLDAHRVQ 245

Query: 241 ELIADGTIYGGMLPKIRCALEAVQGGVTSAHIIDGRVPNAVLLEIFTDSGVGTLIS 296
           +LI DGTIYGGMLPKI+CALEAV+GGV +AHIIDGRVP+AV+LE+FTD+GVGTLI+
Sbjct: 246 QLIEDGTIYGGMLPKIQCALEAVEGGVHAAHIIDGRVPHAVMLEVFTDAGVGTLIT 301


Lambda     K      H
   0.318    0.138    0.381 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 370
Number of extensions: 13
Number of successful extensions: 2
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 301
Length of database: 303
Length adjustment: 27
Effective length of query: 274
Effective length of database: 276
Effective search space:    75624
Effective search space used:    75624
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 48 (23.1 bits)

Align candidate WP_074200628.1 BUQ81_RS01510 (acetylglutamate kinase)
to HMM TIGR00761 (argB: acetylglutamate kinase (EC 2.7.2.8))

Software error:

../bin/blast/fastacmd -i /tmp/list.17640.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.17640.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.

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