Align Phosphoribosyl-AMP cyclohydrolase; PRA-CH; EC 3.5.4.19 (characterized)
to candidate WP_077244243.1 B1A74_RS07525 phosphoribosyl-AMP cyclohydrolase
Query= SwissProt::O26347
(138 letters)
>NCBI__GCF_001995255.1:WP_077244243.1
Length = 143
Score = 142 bits (358), Expect = 2e-39
Identities = 69/122 (56%), Positives = 85/122 (69%), Gaps = 2/122 (1%)
Query: 15 RHNINGEDLIIAVAQDHETGEVLMVAYMNREALRRTLETGTAHYWSTSRGKLWLKGESSG 74
R N + L+ A+AQ +TGEVLM+A+MNREAL TL TG YWS SRG LW KGESSG
Sbjct: 22 RVRFNADGLVPAIAQQGDTGEVLMMAWMNREALEETLRTGRVCYWSRSRGALWRKGESSG 81
Query: 75 HVQRVKDVLVDCDGDAVVLKVEQEGGACHTGYRSCFYRSIDGDELKVREDAVKVFDPEEI 134
VQ++ + +DCDGD V+ KV+Q G ACHTG RSCFY ++GDE+ V D DPE +
Sbjct: 82 QVQQLHSLHLDCDGDTVLAKVDQTGPACHTGRRSCFYLQVEGDEVAVTSD--PQVDPETL 139
Query: 135 YG 136
YG
Sbjct: 140 YG 141
Lambda K H
0.318 0.137 0.410
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 102
Number of extensions: 5
Number of successful extensions: 1
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 138
Length of database: 143
Length adjustment: 15
Effective length of query: 123
Effective length of database: 128
Effective search space: 15744
Effective search space used: 15744
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 42 (20.8 bits)
Align candidate WP_077244243.1 B1A74_RS07525 (phosphoribosyl-AMP cyclohydrolase)
to HMM PF01502 (PRA-CH)
../bin/blast/fastacmd -i /tmp/list.17504.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.17504.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.
For help, please send mail to the webmaster (help@microbesonline.org), giving this error message and the time and date of the error.