Align N-acetyl-gamma-glutamyl-phosphate reductase; Short=AGPR; EC 1.2.1.38 (characterized, see rationale)
to candidate WP_077277213.1 B1C78_RS00050 N-acetyl-gamma-glutamyl-phosphate reductase
Query= uniprot:E4PLW0
(388 letters)
>NCBI__GCF_002000365.1:WP_077277213.1
Length = 343
Score = 448 bits (1153), Expect = e-131
Identities = 219/345 (63%), Positives = 264/345 (76%), Gaps = 2/345 (0%)
Query: 44 VIKVGIVGGTGYTGVELLRILAVHPEVSVSCITSRSEAGMPVAEMYPNLRGHYDLAFSEP 103
+I+ G+VG TGYTGVELLR+L HP+ +TSR AG P+A M+PNLRGH DL F+EP
Sbjct: 1 MIRAGVVGATGYTGVELLRLLLSHPQAQPVVVTSRGNAGEPLAAMFPNLRGHTDLTFTEP 60
Query: 104 DVNVLGACDLVFFATPHGVAMRMVPELMSAGVRVVDLSADFRLKDLDVWANWYGMAHESP 163
D L CD+VFFATPHGVA + EL+S G RV+DLSADFRL+D ++WA WYG H +P
Sbjct: 61 DAGRLADCDVVFFATPHGVAHGLAGELLSRGTRVIDLSADFRLRDPELWARWYGQPHGAP 120
Query: 164 EWAEKAVYGLPEVVRDEIRNAQLVANPGCYPTAVQLGFLPLLEQGLVDPKRLIADAKSGA 223
E + AVYGLPE+ R I A+L+A PGCYPTAV LGF+PLLEQGLVD RL+ADAKSG
Sbjct: 121 ELLDAAVYGLPEINRASIPKARLIAVPGCYPTAVILGFIPLLEQGLVDTGRLVADAKSGV 180
Query: 224 SGAGRQGKIGMLHGEIGESFKAYGASGHRHLPEIRQGLCGAAGGDVGVTFVPHLIPMIRG 283
SGAGR+ ++G L E E+FKAYG GHRHLPEI Q L AG G+TFVPHL+PMIRG
Sbjct: 181 SGAGRKAQVGTLLCEASETFKAYGVPGHRHLPEILQTLAQVAGAQPGLTFVPHLLPMIRG 240
Query: 284 IEATLYAELKNPADFDRLQALFEQRFDDEPFVDVMPFGSHPETRSVRGANQCRMALHRQE 343
I ATLYA L +P +QAL+E R+ DEPFVDVMP GSHPETRSVRG N+CR+A+HR +
Sbjct: 241 IHATLYATLSDPG--TDVQALYETRYRDEPFVDVMPAGSHPETRSVRGTNRCRLAVHRPQ 298
Query: 344 QSNIVIVSSVIDNLVKGAAGQAVQNMNIMFGLKETMGLEAPALLP 388
+ V+V SVIDNLVKGA+GQA+QN+N+MFGL ET GL+ A+LP
Sbjct: 299 DGDTVVVLSVIDNLVKGASGQAIQNLNLMFGLAETTGLDGIAVLP 343
Lambda K H
0.321 0.137 0.412
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 462
Number of extensions: 12
Number of successful extensions: 2
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 388
Length of database: 343
Length adjustment: 30
Effective length of query: 358
Effective length of database: 313
Effective search space: 112054
Effective search space used: 112054
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 49 (23.5 bits)
Align candidate WP_077277213.1 B1C78_RS00050 (N-acetyl-gamma-glutamyl-phosphate reductase)
to HMM TIGR01850 (argC: N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38))
../bin/blast/fastacmd -i /tmp/list.19538.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.19538.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.
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