Alignments for a candidate for argA in Thioalkalivibrio denitrificans ALJD

Align amino-acid N-acetyltransferase (EC 2.3.1.1) (characterized)
to candidate WP_077280366.1 B1C78_RS17130 amino-acid N-acetyltransferase

Query= BRENDA::P22567
         (432 letters)



>NCBI__GCF_002000365.1:WP_077280366.1
          Length = 445

 Score =  480 bits (1235), Expect = e-140
 Identities = 245/430 (56%), Positives = 305/430 (70%), Gaps = 2/430 (0%)

Query: 5   VNWLRHASPYINSHRDRTFVVMLPGEGVEHPNFGNIVHDLVLLHSLGARLVLVHGSRPQI 64
           +NW R+A+PYIN+HR RTFV+   GE V+   F  ++HDL +L SLG RLVLVHG+RPQI
Sbjct: 12  INWFRNAAPYINAHRGRTFVIAFGGEAVQDAGFAQLIHDLAMLQSLGVRLVLVHGARPQI 71

Query: 65  EARLAARGLAPRYHRDLRVTDAPTLECVIDAVGSLRIAIEARLSMDMAASPMQGARLRVA 124
           E RL ARGLA RY   LRVTDA  L  V +A G LR+ IEA LSM +A +PM GAR+RVA
Sbjct: 72  EQRLRARGLAFRYEAGLRVTDADALAAVKEAGGCLRVEIEALLSMGLANTPMSGARIRVA 131

Query: 125 GGNLVTARPIGVVEGVDYHHTGEVRRIDRKGIGRLLDERSIVLLSPLGYSPTGEIFNLAC 184
            GN V A+P+GV +GVDY HTGEVRRID +GI R L+    VLLSPLGYSPTGE+FNL+ 
Sbjct: 132 SGNHVIAKPLGVRDGVDYQHTGEVRRIDAEGIRRRLESGETVLLSPLGYSPTGEVFNLSA 191

Query: 185 EDVAMRAAIDLEAEKLILYGAEQGLLDASGKLVRELRPQQVPAHL--QRLGNSYQAELLD 242
           EDVA   AI L+A+KLI      G  D   + V +L  +Q    L  +R  +   A+ L 
Sbjct: 192 EDVATATAIALKADKLIFLTETPGPRDGRRRRVSQLSVEQAQVWLGGRRKLDPETAQHLK 251

Query: 243 AAAQACRAGVKRSHIVSYTEDGALLSELFTRTGNGTLVAQEQFEQLREAGIEDVGGLIEL 302
           +A  ACR GV R H+V    DGALL EL+TR G GTL+  E +E++R A I+DVGG++EL
Sbjct: 252 SAVHACRQGVARVHLVERNVDGALLLELYTRDGVGTLITGETYERMRRASIDDVGGILEL 311

Query: 303 IRPLEEQGILVRRSREVLEREIEQFSIVEREGLIIACAALYPIADSEAGELACLAVNPEY 362
           I+PLE +GILVRRSRE LE EI++FS++ER+G+++ CAA YP      GELACLA++PEY
Sbjct: 312 IQPLEAEGILVRRSREQLELEIDRFSVIERDGIVLGCAAFYPFPAESVGELACLAIHPEY 371

Query: 363 RHGGRGDELLERIEERARGLGLKTLFVLTTRTAHWFRERGFQPSSVERLPAARASLYNFQ 422
           R  GRGD LLE +E  A  LG+  LFVLTTRTAHWFRERGF+P  +  LP  +  LYN+Q
Sbjct: 372 RTAGRGDRLLEFVEAEAAALGIARLFVLTTRTAHWFRERGFEPGDIRNLPLRKRELYNYQ 431

Query: 423 RNSQVFEKSL 432
           RNS++F K L
Sbjct: 432 RNSKIFIKEL 441


Lambda     K      H
   0.321    0.138    0.398 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 587
Number of extensions: 23
Number of successful extensions: 2
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 432
Length of database: 445
Length adjustment: 32
Effective length of query: 400
Effective length of database: 413
Effective search space:   165200
Effective search space used:   165200
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 51 (24.3 bits)

Align candidate WP_077280366.1 B1C78_RS17130 (amino-acid N-acetyltransferase)
to HMM TIGR01890 (argA: amino-acid N-acetyltransferase (EC 2.3.1.1))

Software error:

../bin/blast/fastacmd -i /tmp/list.19009.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.19009.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.

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