Align N-acetyl-gamma-glutamyl-phosphate reductase; Short=AGPR; EC 1.2.1.38 (characterized, see rationale)
to candidate WP_078717700.1 B5D49_RS10720 N-acetyl-gamma-glutamyl-phosphate reductase
Query= uniprot:E4PLW0
(388 letters)
>NCBI__GCF_900167125.1:WP_078717700.1
Length = 351
Score = 318 bits (814), Expect = 2e-91
Identities = 167/347 (48%), Positives = 226/347 (65%), Gaps = 3/347 (0%)
Query: 45 IKVGIVGGTGYTGVELLRILAVHPEVSVSCITSRSEAGMPVAEMYPNLRGHYD--LAFSE 102
I VG+VG TGYTG+EL RILA HP + + +TSR EAG + ++YP LRG L S
Sbjct: 5 IPVGLVGVTGYTGMELARILAGHPGLELVSVTSRKEAGKRLEDIYPFLRGTGPGALEISL 64
Query: 103 PDVNVLGA-CDLVFFATPHGVAMRMVPELMSAGVRVVDLSADFRLKDLDVWANWYGMAHE 161
P L + C LVF A PH AM M L+ V+VVDLSADFR+ D V+ WY H
Sbjct: 65 PSPRELASRCRLVFLAVPHKTAMEMADALLCENVKVVDLSADFRINDKAVYEQWYATEHT 124
Query: 162 SPEWAEKAVYGLPEVVRDEIRNAQLVANPGCYPTAVQLGFLPLLEQGLVDPKRLIADAKS 221
E+AVYGLPE+ R+EI +A LVANPGCYPT+ LG P+L +GLV+ ++ D+KS
Sbjct: 125 RAHRLEEAVYGLPELYREEIVSADLVANPGCYPTSAILGLCPVLARGLVETDGIVIDSKS 184
Query: 222 GASGAGRQGKIGMLHGEIGESFKAYGASGHRHLPEIRQGLCGAAGGDVGVTFVPHLIPMI 281
G SGAGR+ K+G L E+ +SF+AYG HRH PEI Q L AAG + V+F HL+P+
Sbjct: 185 GTSGAGRKAKVGSLFCEVHDSFRAYGLGTHRHTPEIEQELSKAAGASLTVSFNTHLLPID 244
Query: 282 RGIEATLYAELKNPADFDRLQALFEQRFDDEPFVDVMPFGSHPETRSVRGANQCRMALHR 341
RGI +T+Y L+ D + ++A + +++ EP+V V+P G+ PETR VRG N C + +
Sbjct: 245 RGILSTIYTRLRPGTDLETVRAAYGEQYHGEPWVRVLPEGTLPETRWVRGTNFCDIGVVL 304
Query: 342 QEQSNIVIVSSVIDNLVKGAAGQAVQNMNIMFGLKETMGLEAPALLP 388
++N +I+ + IDNL +GA+GQAV N N+M GL+ GL+A L+P
Sbjct: 305 DSRTNRLIILAAIDNLCRGASGQAVVNANLMLGLEPAAGLQAAPLMP 351
Lambda K H
0.321 0.137 0.412
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 384
Number of extensions: 8
Number of successful extensions: 2
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 388
Length of database: 351
Length adjustment: 30
Effective length of query: 358
Effective length of database: 321
Effective search space: 114918
Effective search space used: 114918
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 49 (23.5 bits)
Align candidate WP_078717700.1 B5D49_RS10720 (N-acetyl-gamma-glutamyl-phosphate reductase)
to HMM TIGR01850 (argC: N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38))
../bin/blast/fastacmd -i /tmp/list.30046.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.30046.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.
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