Alignments for a candidate for cysE in Oleispira antarctica

Align Serine acetyltransferase; SAT; EC 2.3.1.30 (characterized)
to candidate WP_084687490.1 OLEAN_RS07530 serine O-acetyltransferase

Query= SwissProt::Q06750
         (217 letters)



>NCBI__GCF_000967895.1:WP_084687490.1
          Length = 271

 Score =  218 bits (554), Expect = 1e-61
 Identities = 112/219 (51%), Positives = 152/219 (69%), Gaps = 13/219 (5%)

Query: 4   RMLKEDIDTVFDQDPAARSYFEVILTYSGLHAIWAHRIAHALYKRKFYFLARLISQVSRF 63
           R +++D+  VFD+DPAAR+ FEV+ TY G+HAI  HR+A+ L+ R   +LAR +S  SR+
Sbjct: 3   RKIRQDVACVFDRDPAARNTFEVLTTYPGVHAIMHHRLANWLWCRGLKWLARFLSTFSRW 62

Query: 64  FTGIEIHPGATIGRRFFIDHGMGVVIGETCEIGNNVTVFQGVTLGGTGKEKGKRHPTIKD 123
            TGIEIHPGATIG RFFIDHGMGVVIGET EIGN+ T++ GVTLGGT   KGKRHPT++D
Sbjct: 63  MTGIEIHPGATIGERFFIDHGMGVVIGETAEIGNDCTLYHGVTLGGTSWNKGKRHPTLRD 122

Query: 124 DALIATGAKVLGSITVGEGSKIGAGSVVLHDVPDFSTVVGIPGRVVVQNG---KKVRRDL 180
             ++  GAKVLG ITV EG++IG+ +VV  DVP   +VVGIPGR+V +      K R+D+
Sbjct: 123 GVVVGAGAKVLGPITVNEGARIGSNAVVTKDVPAGVSVVGIPGRIVRKADPELDKRRKDI 182

Query: 181 NHQ----------DLPDPVADRFKSLEQQILELKAELED 209
             +          ++PDP+A    +L   +L +  ++ +
Sbjct: 183 ADKIGFDAYGMADEMPDPIARSVNNLMDHMLAVDCKINN 221


Lambda     K      H
   0.323    0.141    0.413 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 242
Number of extensions: 9
Number of successful extensions: 2
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 217
Length of database: 271
Length adjustment: 23
Effective length of query: 194
Effective length of database: 248
Effective search space:    48112
Effective search space used:    48112
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 46 (22.3 bits)

Align candidate WP_084687490.1 OLEAN_RS07530 (serine O-acetyltransferase)
to HMM TIGR01172 (cysE: serine O-acetyltransferase (EC 2.3.1.30))

Software error:

../bin/blast/fastacmd -i /tmp/list.8244.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.8244.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.

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