Align acetolactate synthase (subunit 1/2) (EC 2.2.1.6) (characterized)
to candidate WP_085120738.1 B9O00_RS01970 acetolactate synthase small subunit
Query= BRENDA::P00894
(163 letters)
>NCBI__GCF_900177295.1:WP_085120738.1
Length = 182
Score = 128 bits (322), Expect = 4e-35
Identities = 74/161 (45%), Positives = 107/161 (66%), Gaps = 3/161 (1%)
Query: 2 RRILSVLLENESGALSRVIGLFSQRGYNIESLTVAPTD-DPTLSRMTIQTVGDEKVLEQI 60
+R ++VL++NE G L+RVIGLFS RGYNIESLTV+ D + LSR+T+ T G ++LEQI
Sbjct: 21 KRTIAVLVDNEPGVLARVIGLFSGRGYNIESLTVSEVDQENRLSRITVVTSGTPQILEQI 80
Query: 61 EKQLHKLVDVLRVSELGQ-GAHVEREIMLVKIQASGYGRDEVKRNTEIFRGQIIDVTPSL 119
+ QL +LV V RV +L G VERE+ LVK+ +G R E R +IF+ +++D
Sbjct: 81 KAQLDRLVPVHRVRDLTMAGGFVERELALVKVAGTGEKRVEALRIADIFKAEVVDAGLDY 140
Query: 120 YTVQLAGTSGKLDAFLASIRDVAKIVEVARSGVVGLSRGDK 160
+ Q+ S K+D F+ +R + +VE+AR+GVV + RG K
Sbjct: 141 FVFQIQHRSDKVDRFIELMRPLG-LVELARTGVVAILRGAK 180
Lambda K H
0.318 0.136 0.360
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 96
Number of extensions: 5
Number of successful extensions: 4
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 163
Length of database: 182
Length adjustment: 18
Effective length of query: 145
Effective length of database: 164
Effective search space: 23780
Effective search space used: 23780
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 44 (21.6 bits)
Align candidate WP_085120738.1 B9O00_RS01970 (acetolactate synthase small subunit)
to HMM TIGR00119 (ilvN: acetolactate synthase, small subunit (EC 2.2.1.6))
../bin/blast/fastacmd -i /tmp/list.21690.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.21690.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.
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