Align Aspartate-semialdehyde dehydrogenase; ASA dehydrogenase; ASADH; Aspartate-beta-semialdehyde dehydrogenase; EC 1.2.1.11 (characterized)
to candidate WP_086508772.1 BZY95_RS04435 aspartate-semialdehyde dehydrogenase
Query= SwissProt::Q51344 (370 letters) >NCBI__GCF_002151265.1:WP_086508772.1 Length = 370 Score = 532 bits (1371), Expect = e-156 Identities = 253/370 (68%), Positives = 305/370 (82%) Query: 1 MKRVGLIGWRGMVGSVLMQRMLEERDFDLIEPVFFTTSNVGGQGPEVGKDIAPLKDAYSI 60 M +VG +GWRGMVGSVLMQRM E+ DFD IEP+FFTTS VG GP++G D+ PLKDA I Sbjct: 1 MLKVGFVGWRGMVGSVLMQRMQEDGDFDGIEPIFFTTSQVGKPGPDIGVDVPPLKDATDI 60 Query: 61 DELKTLDVILTCQGGDYTSEVFPKLREAGWQGYWIDAASSLRMEDDAVIVLDPVNRKVID 120 DELK LDV++TCQGGDYT +V+ LR +GW+GYWIDAAS+LRMED+A IVLDPVNR+VID Sbjct: 61 DELKALDVVITCQGGDYTKQVYGDLRGSGWKGYWIDAASTLRMEDEATIVLDPVNRRVID 120 Query: 121 QALDAGTRNYIGGNCTVSLMLMALGGLFDAGLVEWMSAMTYQAASGAGAQNMRELLKQMG 180 L G + ++GGNCTVSLMLM LGGLF+A L+EWM++MTYQAASG+GA++MRELL QMG Sbjct: 121 DQLARGAKTFVGGNCTVSLMLMGLGGLFEADLIEWMTSMTYQAASGSGAKHMRELLLQMG 180 Query: 181 AAHASVADDLANPASAILDIDRKVAETLRSEAFPTEHFGAPLGGSLIPWIDKELPNGQSR 240 A VAD+L +PASAIL+IDRKV + +R FP ++F APL GSL+PWID +L NGQSR Sbjct: 181 ALRDCVADELNDPASAILEIDRKVTQAMRGGDFPIDNFTAPLAGSLLPWIDTKLDNGQSR 240 Query: 241 EEWKAQAETNKILARFKNPIPVDGICVRVGAMRCHSQALTIKLNKDVPLTDIEGLISQHN 300 EEWK ETNKIL NP+P+DGICVR+GAMR HSQA TIKL KDVP+ +IE I++HN Sbjct: 241 EEWKGSVETNKILGIQDNPVPIDGICVRIGAMRSHSQAFTIKLKKDVPIDEIEERIAKHN 300 Query: 301 PWVKLVPNHREVSVRELTPAAVTGTLSVPVGRLRKLNMGSQYLGAFTVGDQLLWGAAEPL 360 WVK++PN +E ++ LTP+ VTGTLSVPVGRLRKLNMG +YL AFT GDQLLWGAAEPL Sbjct: 301 EWVKVIPNDKEATIAGLTPSVVTGTLSVPVGRLRKLNMGGEYLTAFTAGDQLLWGAAEPL 360 Query: 361 RRMLRILLER 370 +RML+IL E+ Sbjct: 361 KRMLKILREQ 370 Lambda K H 0.319 0.136 0.409 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 1 Number of Hits to DB: 522 Number of extensions: 11 Number of successful extensions: 1 Number of sequences better than 1.0e-02: 1 Number of HSP's gapped: 1 Number of HSP's successfully gapped: 1 Length of query: 370 Length of database: 370 Length adjustment: 30 Effective length of query: 340 Effective length of database: 340 Effective search space: 115600 Effective search space used: 115600 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 49 (23.5 bits)
Align candidate WP_086508772.1 BZY95_RS04435 (aspartate-semialdehyde dehydrogenase)
to HMM TIGR01745 (asd: aspartate-semialdehyde dehydrogenase (EC 1.2.1.11))
../bin/blast/fastacmd -i /tmp/list.14106.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.14106.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.
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