Align Malate synthase G (EC 2.3.3.9) (characterized)
to candidate WP_086509169.1 BZY95_RS06550 malate synthase G
Query= reanno::psRCH2:GFF353
(726 letters)
>NCBI__GCF_002151265.1:WP_086509169.1
Length = 728
Score = 966 bits (2497), Expect = 0.0
Identities = 477/729 (65%), Positives = 577/729 (79%), Gaps = 7/729 (0%)
Query: 1 MTERVQVGGLQVAKVLYDFVNNEAIPGTGVDAAAFWAGADSVIHDLAPKNRALLAKRDDL 60
M+ERV LQVA L F+N++A+PGTG+DA +FWAG D++ HDL PKNR LLA+R+ L
Sbjct: 1 MSERVTRHRLQVAAELDRFINDQALPGTGIDAESFWAGVDAIFHDLTPKNRELLAERERL 60
Query: 61 QAQIDAWHQARAGQAHDAVAYKSFLQEIGYLLPEAEDFQATTENVDEEIARMAGPQLVVP 120
QAQ+D WH+ G D Y++FL+EIGYL+ +T NVD E+A AGPQLVVP
Sbjct: 61 QAQLDTWHRENPGPVRDMSVYRAFLEEIGYLVDAPAQVTVSTANVDREVAIQAGPQLVVP 120
Query: 121 IMNARFALNAANARWGSLYDALYGTDAISEADGASKGPGYNEIRGNKVIAYARNFLNEAA 180
+ NAR+ALNAANARWGSLYDALYGTDAISE GA KG GYN RG KVIAYAR L+ AA
Sbjct: 121 VSNARYALNAANARWGSLYDALYGTDAISEEGGAEKGSGYNPKRGEKVIAYARGVLDLAA 180
Query: 181 PLETGSHVDSTGYRIEGGKLVVSLKDGSTTGLKNPAQLQGFQGEASAPIAVLLKNNGIHF 240
PL TGSH D+ Y + G+LVVSL+ G TGLK P +L G+ G+A+ P ++LL N+G+H
Sbjct: 181 PLATGSHRDAVKYVLRDGRLVVSLEGGRETGLKEPGKLVGYSGDAANPESILLSNHGLHL 240
Query: 241 EIQIDPASPIGQTDAAGVKDILMESALTTIMDCEDSIAAVDADDKTVVYRNWLGLMKGDL 300
EIQIDP+ PIG+TD AGVKD+L+E+ALT IMDCEDS+AAVDA+DK VY NWLGLMKGDL
Sbjct: 241 EIQIDPSHPIGKTDPAGVKDLLVEAALTAIMDCEDSVAAVDAEDKVGVYANWLGLMKGDL 300
Query: 301 VEELEKGGKRITRAMNPDRVYTKADGNGELTLHGRSLLFIRNVGHLMTNDAILDKEGNEV 360
E +EKGGK TR ++ DR YT +G G LTL GRSL+F+RNVGHLMT A+LD +GNE+
Sbjct: 301 EEAIEKGGKTFTRRLHADRSYTTPEG-GSLTLPGRSLMFVRNVGHLMTTPAVLDADGNEL 359
Query: 361 PEGIMDGLFTSLIAVHNL-NGNTSRKNTRTGSMYIVKPKMHGPEEVAFATELFGRVEDVL 419
PEGI+DG+ TSL+A+H+L G +N+R+GS+YIVKPKMHGP+EVAF+ ELFGRVED+L
Sbjct: 360 PEGILDGIVTSLLALHDLKKGENDPRNSRSGSVYIVKPKMHGPKEVAFSNELFGRVEDLL 419
Query: 420 GLPRNTLKVGIMDEERRTTINLKACIKEARERVVFINTGFLDRTGDEIHTSMEAGPMVRK 479
GL R+TLK+GIMDEERRT++NLKACI EA RVVFINTGFLDRTGDE+HT+MEAGPM+RK
Sbjct: 420 GLARDTLKMGIMDEERRTSVNLKACIAEAASRVVFINTGFLDRTGDEMHTAMEAGPMIRK 479
Query: 480 AAMKAEKWISAYENNNVDVGLACGLQGKAQIGKGMWAMPDLMAAMLEQKVGHPMAGANTA 539
MK WI AYE NNV VGLACGL+G+AQIGKGMWAMPDLMAAMLEQK+GHP AGANTA
Sbjct: 480 GDMKNAAWIGAYERNNVLVGLACGLRGRAQIGKGMWAMPDLMAAMLEQKIGHPKAGANTA 539
Query: 540 WVPSPTAATLHAMHYHKIDVQARQVEL-AKREKA----SIDDILTIPLAQDTNWSEEEKR 594
WVPSPTAATLHA+HYH+IDV Q EL A+ E A +D +LT+P+A+ WS+E +
Sbjct: 540 WVPSPTAATLHALHYHQIDVAEIQRELEAQGEPALLEELLDKLLTVPVAERVEWSDEAIQ 599
Query: 595 NELDNNSQGILGYMVRWVEQGVGCSKVPDINDIALMEDRATLRISSQHVANWMRHGVVTK 654
ELDNN QGILGY+VRWVE GVGCSKVPDI+D+ LMEDRATLRISSQH+ANW+ HGVV
Sbjct: 600 QELDNNCQGILGYVVRWVEHGVGCSKVPDIHDVGLMEDRATLRISSQHIANWLHHGVVDA 659
Query: 655 DQVVESLKRMAPVVDRQNQGDPLYRPMAPDFDNSVAFQAALELVLEGTKQPNGYTEPVLH 714
++V ++L+RMA VVD QN GDP Y M+ DF S AF+AA +L+ +G QP+GYTEP+LH
Sbjct: 660 ERVQKTLERMAKVVDEQNAGDPAYTAMSADFAASTAFKAASDLIFKGRVQPSGYTEPLLH 719
Query: 715 RRRREFKAK 723
R KA+
Sbjct: 720 HWRAVHKAR 728
Lambda K H
0.316 0.133 0.386
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 1517
Number of extensions: 58
Number of successful extensions: 4
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 726
Length of database: 728
Length adjustment: 40
Effective length of query: 686
Effective length of database: 688
Effective search space: 471968
Effective search space used: 471968
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)
Align candidate WP_086509169.1 BZY95_RS06550 (malate synthase G)
to HMM TIGR01345 (glcB: malate synthase G (EC 2.3.3.9))
../bin/blast/fastacmd -i /tmp/list.13740.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.13740.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.
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