Alignments for a candidate for fadA in Billgrantia desiderata SP1

Align acetyl-CoA C-acetyltransferase (EC 2.3.1.16) (characterized)
to candidate WP_086510452.1 BZY95_RS13540 acetyl-CoA C-acetyltransferase

Query= metacyc::MONOMER-20831
         (393 letters)



>NCBI__GCF_002151265.1:WP_086510452.1
          Length = 391

 Score =  580 bits (1496), Expect = e-170
 Identities = 294/392 (75%), Positives = 333/392 (84%), Gaps = 1/392 (0%)

Query: 1   MQDVVIVAATRTAVGSFQGSLASIPAPELGAAVIRRLLEQTGLDPAQVDEVILGQVLTAG 60
           MQDVVIVAA RTA+G+F GSLA I A +LGA VI+ +L  TG+   Q+DEV+LGQVLTAG
Sbjct: 1   MQDVVIVAARRTAIGAFGGSLAGIAASDLGALVIKDILASTGVAADQIDEVLLGQVLTAG 60

Query: 61  SGQNPARQASILAGLPHAVPSLTLNKVCGSGLKALHLGAQAIRCGDAEVIIAGGMENMSL 120
            GQNPARQA+I AGLP AVP++T+NKVCGSGLKALHL  QAIRCGDAE+IIAGG ENMS 
Sbjct: 61  VGQNPARQAAIKAGLPAAVPAMTINKVCGSGLKALHLATQAIRCGDAELIIAGGQENMSA 120

Query: 121 APYVLPAARTGLRMGHAKMIDSMITDGLWDAFNDYHMGITAENLVDKYGISREAQDAFAA 180
           +P+VLP +R G RMG  K ID+M+ DGLWDAFNDYHMGITAENL +KYGI+RE  D FAA
Sbjct: 121 SPHVLPNSRNGQRMGDWKAIDTMVHDGLWDAFNDYHMGITAENLAEKYGITREEMDEFAA 180

Query: 181 ASQQKATAAIEAGRFVDEITPILIPQRKGDPVAFAVDEQPRAGTTAESLAKLKPAFKKDG 240
           ASQQKA AAI  GRF  +I P+ IPQRKGDPV F  DE PR   +A+ LA ++PAFKKDG
Sbjct: 181 ASQQKAAAAIREGRFKGQIVPVEIPQRKGDPVVFDTDENPRE-VSADKLAGMRPAFKKDG 239

Query: 241 SVTAGNASSLNDGAAAVLLMSADKAKALGLPVLARIASYANAGVDPAIMGIGPVSATRRC 300
           ++TAGNASS+NDGAAAV++ SA KAK LGL  LARIA+Y+NAGVDPAIMGIGP  ATRRC
Sbjct: 240 TITAGNASSINDGAAAVMICSAAKAKELGLEPLARIAAYSNAGVDPAIMGIGPAPATRRC 299

Query: 301 LDKAGWSLGDLDLIEANEAFAAQSLAVGKELEWDAEKVNVNGGAIAIGHPIGASGCRVLV 360
           L+KAGWSL DLDLIEANEAFAAQ+L+V KEL WD  KVNVNGGAIA+GHPIGASGCRVLV
Sbjct: 300 LEKAGWSLDDLDLIEANEAFAAQALSVNKELGWDTSKVNVNGGAIALGHPIGASGCRVLV 359

Query: 361 TLLHEMIKRDAKKGLATLCIGGGQGVALALER 392
           +LLHEMI RDAKKGLATLCIGGGQGVALA+ER
Sbjct: 360 SLLHEMIARDAKKGLATLCIGGGQGVALAIER 391


Lambda     K      H
   0.317    0.133    0.378 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 508
Number of extensions: 12
Number of successful extensions: 2
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 393
Length of database: 391
Length adjustment: 31
Effective length of query: 362
Effective length of database: 360
Effective search space:   130320
Effective search space used:   130320
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 50 (23.9 bits)

Align candidate WP_086510452.1 BZY95_RS13540 (acetyl-CoA C-acetyltransferase)
to HMM TIGR01930 (acetyl-CoA C-acyltransferase (EC 2.3.1.16))

Software error:

../bin/blast/fastacmd -i /tmp/list.3187.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.3187.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.

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