Alignments for a candidate for tpi in Billgrantia desiderata SP1

Align triose-phosphate isomerase (EC 5.3.1.1) (characterized)
to candidate WP_086510460.1 BZY95_RS13595 triose-phosphate isomerase

Query= BRENDA::P0A858
         (255 letters)



>NCBI__GCF_002151265.1:WP_086510460.1
          Length = 249

 Score =  228 bits (581), Expect = 9e-65
 Identities = 123/249 (49%), Positives = 157/249 (63%), Gaps = 1/249 (0%)

Query: 1   MRHPLVMGNWKLNGSRHMVHELVSNLRKELAGVAGCAVAIAPPEMYIDMAKREAEGSHIM 60
           MR PL+ GNWK+NGS  +V E      ++    A   V + PP  Y+D A+R  EG+ I 
Sbjct: 1   MRTPLIAGNWKMNGSAALVEEFGHRFAEKTLP-ASLDVVVLPPFPYLDAARRAFEGTPIR 59

Query: 61  LGAQNVDLNLSGAFTGETSAAMLKDIGAQYIIIGHSERRTYHKESDELIAKKFAVLKEQG 120
           LGAQ ++   SGA TGE S  MLK+ G +Y + GHSERR  ++E DE +  +       G
Sbjct: 60  LGAQTLNPLHSGARTGEVSGRMLKEFGVEYALAGHSERRQLYREDDEAVLDRLLAALNVG 119

Query: 121 LTPVLCIGETEAENEAGKTEEVCARQIDAVLKTQGAAAFEGAVIAYEPVWAIGTGKSATP 180
           +TP+LC+GET  E +AGKT EV  RQ+  V+        E  VIAYEPVWAIGTG++ATP
Sbjct: 120 ITPILCVGETLEERDAGKTMEVVLRQVGYVMARLEPDQRERVVIAYEPVWAIGTGRTATP 179

Query: 181 AQAQAVHKFIRDHIAKVDANIAEQVIIQYGGSVNASNAAELFAQPDIDGALVGGASLKAD 240
            QAQ V   IR++ A  D  +A  + + YGGS+NA NAAEL AQPDIDG LVGGASLK D
Sbjct: 180 EQAQEVMAGIREYQAGYDRALAAGLRLLYGGSMNADNAAELLAQPDIDGGLVGGASLKVD 239

Query: 241 AFAVIVKAA 249
            F  I ++A
Sbjct: 240 DFLAICQSA 248


Lambda     K      H
   0.316    0.130    0.366 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 179
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 255
Length of database: 249
Length adjustment: 24
Effective length of query: 231
Effective length of database: 225
Effective search space:    51975
Effective search space used:    51975
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 46 (22.3 bits)

Align candidate WP_086510460.1 BZY95_RS13595 (triose-phosphate isomerase)
to HMM TIGR00419 (tpiA: triose-phosphate isomerase (EC 5.3.1.1))

Software error:

../bin/blast/fastacmd -i /tmp/list.5569.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.5569.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.

For help, please send mail to the webmaster (help@microbesonline.org), giving this error message and the time and date of the error.