Alignments for a candidate for prs in Billgrantia desiderata SP1

Align Ribose-phosphate pyrophosphokinase; RPPK; EC 2.7.6.1; 5-phospho-D-ribosyl alpha-1-diphosphate synthase; Phosphoribosyl diphosphate synthase; Phosphoribosyl pyrophosphate synthase; P-Rib-PP synthase; PRPP synthase; PRPPase (uncharacterized)
to candidate WP_086510738.1 BZY95_RS15130 ribose-phosphate diphosphokinase

Query= curated2:Q8TUT6
         (291 letters)



>NCBI__GCF_002151265.1:WP_086510738.1
          Length = 297

 Score =  153 bits (387), Expect = 4e-42
 Identities = 106/279 (37%), Positives = 155/279 (55%), Gaps = 10/279 (3%)

Query: 14  RRLAEELDAELAPVEEDRFPDGEQIVRVPP-ELDGTVVVVHSMSPPQDENLVKAIITLDA 72
           +RLAE +  E   +E  RFPD E  +R+P  EL   +VV  S++ P D+ LV+ ++    
Sbjct: 16  QRLAEAVGIEALRMERHRFPDEELCLRLPDAELPECLVVYRSLNRPNDK-LVELMLLARH 74

Query: 73  ARENGAEEVIAIVPYMAYSRQDRRFEPGEPVSFRAVARAVSANADALITVD--LHEPGTL 130
           ARE G   ++ + PY+AY RQD  F PGE VS R V   ++   DALITVD  LH    L
Sbjct: 75  ARERGVRRLVLVAPYLAYMRQDIAFRPGELVSQRLVGGFLAELFDALITVDPHLHRIERL 134

Query: 131 KYFDVP---AENVSAAEELGKYLAERFEGEDLVVIGPDEGARELAREVASICGVEYDHLE 187
           +   VP   A  +SAA  L + +AER    D +++GPD  + +     A   G+ Y    
Sbjct: 135 EQA-VPLRQAVALSAAPALAEAIAER--RRDALLLGPDAESAQWVESAARATGLAYGVCT 191

Query: 188 KKRLSGDEVEIHPKELDVEGRTVVLVDDMIDTGGTMVEAARALRDQGAGTLYAACTHALL 247
           K+R    EVEI   EL   GR VVL+DD+  +G T+ +AAR +   GA  +  A THAL 
Sbjct: 192 KQRHGDREVEIALPELAFAGRRVVLLDDIASSGRTLAQAARRVLAAGAAGVDVAVTHALF 251

Query: 248 TRNAATRLLASGFEDIIATDTVPNPFEKVSVAPPVAEAV 286
             +A + +  +G E++ +TD++P+    V +AP +A A+
Sbjct: 252 AGDALSVIRQAGVEEVWSTDSIPHQSNAVLLAPALAAAL 290


Lambda     K      H
   0.314    0.134    0.370 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 184
Number of extensions: 8
Number of successful extensions: 2
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 291
Length of database: 297
Length adjustment: 26
Effective length of query: 265
Effective length of database: 271
Effective search space:    71815
Effective search space used:    71815
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 48 (23.1 bits)

Align candidate WP_086510738.1 BZY95_RS15130 (ribose-phosphate diphosphokinase)
to HMM TIGR01251 (prs: ribose-phosphate diphosphokinase (EC 2.7.6.1))

Software error:

../bin/blast/fastacmd -i /tmp/list.29182.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.29182.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.

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