Align 2-methylisocitrate lyase; 2-MIC; MICL; (2R,3S)-2-methylisocitrate lyase; EC 4.1.3.30 (characterized)
to candidate WP_086511658.1 BZY95_RS20055 methylisocitrate lyase
Query= SwissProt::Q8EJW1
(292 letters)
>NCBI__GCF_002151265.1:WP_086511658.1
Length = 301
Score = 386 bits (991), Expect = e-112
Identities = 196/293 (66%), Positives = 233/293 (79%), Gaps = 1/293 (0%)
Query: 1 MTQ-SAGLRFRQALANSKPLQIVGTTNAYFALMAEQTGFQALYLSGAGVANASYGLPDLG 59
MTQ + G RFR AL ++PL IVGT NAY A+MAE+ G QA+YLSG GVANAS+GLPDLG
Sbjct: 1 MTQPTPGARFRAALEANRPLPIVGTINAYTAMMAERVGHQAIYLSGGGVANASFGLPDLG 60
Query: 60 MTSMNDVLIDAGRITSATQLPLLVDIDTGWGGAFNIARTIKEFEKIGVAAVHMEDQVSQK 119
MTSMNDV+ DA RI AT LPLLVDIDTGWGGAFNIART+KE ++ GVAAVH+EDQV+QK
Sbjct: 61 MTSMNDVVQDAHRICGATDLPLLVDIDTGWGGAFNIARTVKEMQRAGVAAVHLEDQVAQK 120
Query: 120 RCGHRPNKAVVSTEEMVDRIKAAVDARTDPNFVIMARTDAVAVEGLEAGIERAKAYIAAG 179
RCGHRPNK +VS +EMVDRIKAA DAR DP+F ++ARTDA EGL+A IERA A I AG
Sbjct: 121 RCGHRPNKEIVSKQEMVDRIKAAADARIDPDFYLIARTDAFQKEGLDAAIERANACIEAG 180
Query: 180 ADMIFAEALTELDQYRHFKAQVKAPILANMTEFGQTQLFNKEELAQAGADMVLYPLGTFR 239
AD IFAEA+ LD YR F +V APILAN+TEFG T LF ++EL + G MVLYPL FR
Sbjct: 181 ADAIFAEAVHTLDDYRAFCERVDAPILANITEFGATPLFTQQELGEVGCRMVLYPLSAFR 240
Query: 240 AANQAALKVMQALMNDGHQRNVLDTMQTRADLYKYLGYHAFEDKLDQLFSQDK 292
A N AALKV +++ GHQR+V++ MQTR +LY +L YHAFE KLD LF++++
Sbjct: 241 AMNAAALKVYRSIHEKGHQRDVVELMQTRDELYDFLNYHAFEQKLDALFAENQ 293
Lambda K H
0.319 0.132 0.369
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 298
Number of extensions: 7
Number of successful extensions: 1
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 292
Length of database: 301
Length adjustment: 26
Effective length of query: 266
Effective length of database: 275
Effective search space: 73150
Effective search space used: 73150
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 48 (23.1 bits)
Align candidate WP_086511658.1 BZY95_RS20055 (methylisocitrate lyase)
to HMM TIGR02317 (prpB: methylisocitrate lyase (EC 4.1.3.30))
../bin/blast/fastacmd -i /tmp/list.16821.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.16821.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.
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