Align Acetyl-coenzyme A synthetase (EC 6.2.1.1) (characterized)
to candidate WP_086512010.1 BZY95_RS21920 acetate--CoA ligase
Query= reanno::pseudo5_N2C3_1:AO356_18695
(651 letters)
>NCBI__GCF_002151265.1:WP_086512010.1
Length = 649
Score = 954 bits (2467), Expect = 0.0
Identities = 446/638 (69%), Positives = 527/638 (82%)
Query: 6 LYPVRPEVAASTLTDEATYKAMYQQSVVNPDGFWREQAKRLDWIKPFTTVKQTSFDDHHV 65
+YPVR ++AA+ D Y+AMYQQSV +P+GFW EQAKR+DW K T +K TSFD H+V
Sbjct: 7 VYPVRDDIAANAWIDREKYQAMYQQSVDDPEGFWAEQAKRIDWFKAPTKIKHTSFDPHNV 66
Query: 66 DIKWFADGTLNVSYNCLDRHLAERGDQIAIIWEGDDPSESRNITYRELHEEVCKFANALR 125
DI+WF DGTLN S +CLDRHL +RGDQ AIIWEGDDP +S++++YRELH + C+ ANAL+
Sbjct: 67 DIRWFEDGTLNASVSCLDRHLEKRGDQTAIIWEGDDPKDSKHVSYRELHAKTCQLANALK 126
Query: 126 GQDVHRGDVVTIYMPMIPEAVVAMLACTRIGAIHSVVFGGFSPEALAGRIIDCKSKVVIT 185
+ +GDVVT+YMPMIPEA VAMLAC RIGA+HSVVFGGFSP+ALA RI+ S++VIT
Sbjct: 127 ELGIGKGDVVTLYMPMIPEAAVAMLACARIGAVHSVVFGGFSPDALAQRIVGADSRLVIT 186
Query: 186 ADEGVRAGKKIPLKANVDDALTNPETSSIQKVIVCKRTAGNIKWNQHRDIWYEDLMKVAG 245
ADE VR GK +PLK NVD ALT T +KV+V KRT G+I+W + RD+WY DL+
Sbjct: 187 ADESVRGGKHVPLKDNVDAALTRKGTEVCEKVLVVKRTGGDIEWKEGRDVWYHDLVDKQS 246
Query: 246 TVCAPKEMGAEEALFILYTSGSTGKPKGVQHTTAGYLLYAALTHERVFDYKPGEVYWCTA 305
C +EM AE+ LFILYTSGSTG PKG++HTT GYL+YA+LTH+ +FDY+ GEVYWCTA
Sbjct: 247 ADCPAEEMNAEDPLFILYTSGSTGAPKGLKHTTGGYLVYASLTHQYIFDYQDGEVYWCTA 306
Query: 306 DVGWVTGHSYIVYGPLANGATTLLFEGVPNYPDITRVAKVIDKHKVSILYTAPTAIRAMM 365
DVGWVTGHSYIVYGPLANGATTL+FEGVP+YP R+ +V+DKH V+ILYTAPTAIRA+M
Sbjct: 307 DVGWVTGHSYIVYGPLANGATTLMFEGVPSYPSHGRMGEVVDKHNVAILYTAPTAIRALM 366
Query: 366 ASGTAAVEGADGSSLRLLGSVGEPINPEAWDWYYKNVGKERCPIVDTWWQTETGGVLISP 425
A G ++ + SLRLLGSVGEPINPEAW+WY++ +G +CPIVDTWWQTETGG++I+P
Sbjct: 367 AHGDGVMDSSKRDSLRLLGSVGEPINPEAWEWYHRVIGNSKCPIVDTWWQTETGGIMIAP 426
Query: 426 LPGATALKPGSATRPFFGVVPALVDNLGNLIEGAAEGNLVILDSWPGQARTLYGDHDRFV 485
LPGA LKPGSAT PFFGV PAL+D+ GN ++GA +GNLVI DSWPGQAR+++GDHDRF+
Sbjct: 427 LPGAMDLKPGSATLPFFGVQPALLDSEGNELQGAVDGNLVISDSWPGQARSIWGDHDRFI 486
Query: 486 DTYFKTFSGMYFTGDGARRDEDGYYWITGRVDDVLNVSGHRMGTAEIESAMVAHPKVAEA 545
TYF T+ G YFTGDG RRDEDGYYWITGRVDDVLNVSGHRMGTAEIES++VAH VAEA
Sbjct: 487 QTYFSTYKGYYFTGDGCRRDEDGYYWITGRVDDVLNVSGHRMGTAEIESSLVAHEAVAEA 546
Query: 546 AVVGVPHDIKGQGIYVYVTLNAGEETSEALRLELKNWVRKEIGPIASPDVIQWAPGLPKT 605
AVVG PHDIKGQGIY+YVTL G E ++ L+ EL WVRK+IGPIASPDVIQWAPGLPKT
Sbjct: 547 AVVGFPHDIKGQGIYIYVTLGDGVEPTDELKKELTQWVRKDIGPIASPDVIQWAPGLPKT 606
Query: 606 RSGKIMRRILRKIATAEYDGLGDISTLADPGVVAHLIE 643
RSGKIMRRILRKIA E DGLGD STLADP VV LIE
Sbjct: 607 RSGKIMRRILRKIAANETDGLGDTSTLADPSVVDDLIE 644
Lambda K H
0.318 0.135 0.418
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 1464
Number of extensions: 52
Number of successful extensions: 1
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 651
Length of database: 649
Length adjustment: 38
Effective length of query: 613
Effective length of database: 611
Effective search space: 374543
Effective search space used: 374543
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 54 (25.4 bits)
Align candidate WP_086512010.1 BZY95_RS21920 (acetate--CoA ligase)
to HMM TIGR02188 (acs: acetate--CoA ligase (EC 6.2.1.1))
../bin/blast/fastacmd -i /tmp/list.30140.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.30140.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.
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