Align acetolactate synthase (subunit 1/2) (EC 2.2.1.6) (characterized)
to candidate WP_089299960.1 CHB84_RS03210 acetolactate synthase small subunit
Query= BRENDA::P9WKJ3
(168 letters)
>NCBI__GCF_900188115.1:WP_089299960.1
Length = 168
Score = 219 bits (559), Expect = 1e-62
Identities = 113/160 (70%), Positives = 136/160 (85%)
Query: 5 THTLSVLVEDKPGVLARVAALFSRRGFNIESLAVGATECKDRSRMTIVVSAEDTPLEQIT 64
THTLSVLVE+KPGVLARVA LFSRRGFNI+SLAVG TE + SRMTIVV+ E+ PLEQ+T
Sbjct: 3 THTLSVLVENKPGVLARVAGLFSRRGFNIDSLAVGPTENPEISRMTIVVAVEELPLEQVT 62
Query: 65 KQLNKLINVIKIVEQDDEHSVSRELALIKVQADAGSRSQVIEAVNLFRANVIDVSPESLT 124
KQLNKL+NVIKIVE ++ SV REL L K++ADA RSQV+E V+LFRA V+DVSPE++T
Sbjct: 63 KQLNKLVNVIKIVELEEPSSVQRELLLAKIRADATVRSQVLEIVDLFRAKVVDVSPEAVT 122
Query: 125 VEATGNRGKLEALLRVLEPFGIREIAQSGMVSLSRGPRGI 164
+EATG K+ ALLR+LEP+GIRE+ QSGMV++ RGPR I
Sbjct: 123 IEATGPVDKINALLRMLEPYGIRELVQSGMVAVGRGPRSI 162
Lambda K H
0.315 0.131 0.347
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 126
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 168
Length of database: 168
Length adjustment: 18
Effective length of query: 150
Effective length of database: 150
Effective search space: 22500
Effective search space used: 22500
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 43 (21.2 bits)
Align candidate WP_089299960.1 CHB84_RS03210 (acetolactate synthase small subunit)
to HMM TIGR00119 (ilvN: acetolactate synthase, small subunit (EC 2.2.1.6))
../bin/blast/fastacmd -i /tmp/list.19777.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.19777.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.
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