Alignments for a candidate for ilvI in Desulfuromusa kysingii DSM 7343

Align acetohydroxyacid synthase subunit B (EC 2.2.1.6) (characterized)
to candidate WP_092345614.1 BLU87_RS05645 biosynthetic-type acetolactate synthase large subunit

Query= metacyc::MONOMER-18810
         (585 letters)



>NCBI__GCF_900107645.1:WP_092345614.1
          Length = 565

 Score =  618 bits (1594), Expect = 0.0
 Identities = 309/567 (54%), Positives = 404/567 (71%), Gaps = 5/567 (0%)

Query: 18  EMIGAEILVHALAEEGVEYVWGYPGGAVLYIYDELHKQTKFEHILVRHEQAAVHAADGYA 77
           E+ G++IL+ +L  EGV+ V+GYPGGAV+ IYD+L  ++  +HIL RHEQAAVHAADGYA
Sbjct: 2   ELTGSQILLESLKSEGVDTVFGYPGGAVINIYDDLF-ESSIKHILTRHEQAAVHAADGYA 60

Query: 78  RATGKVGVALVTSGPGVTNAVTGIATAYLDSIPMVVITGNVPTHAIGQDAFQECDTVGIT 137
           R TGKVGVA+ TSGPG TN VTGIATAY+DS+PMV+I G VPT  IG DAFQE D  GIT
Sbjct: 61  RCTGKVGVAIATSGPGATNTVTGIATAYMDSVPMVIICGQVPTPLIGNDAFQEADICGIT 120

Query: 138 RPIVKHNFLVKDVRDLAATIKKAFFIAATGRPGPVVVDIPKDVSRNACKYEYPKSIDMRS 197
           RP  KHNFLVKD+RDLA TIK+AF+IA TGRPGPV+VD+PKD+  +  K++YP+++ +R 
Sbjct: 121 RPCTKHNFLVKDIRDLAKTIKEAFYIARTGRPGPVLVDLPKDIQVSHYKFKYPETVSLRG 180

Query: 198 YNPVNKGHSGQIRKAVALLQGAERPYIYTGGGVVLANASDELRQLAALTGHPVTNTLMGL 257
           Y P   G+  Q+ KA  L+  A +P +Y GGG+ L+ A D L +LA  T  PVT TLM +
Sbjct: 181 YKPTYSGNMRQVEKAAKLILAARKPVLYVGGGIALSGADDVLLRLAEQTQIPVTTTLMAM 240

Query: 258 GAFPGTSKQFVGMLGMHGTYEANMAMQNCDVLIAIGARFDDRVIGNPAHFTSQARKIIHI 317
            AFP      +GMLGMHGT+ ANM++  CD+LIA+G+RFDDRV G    F  +A KIIH+
Sbjct: 241 AAFPQRHPLALGMLGMHGTFYANMSVTECDLLIAVGSRFDDRVTGRIDSFAEKA-KIIHV 299

Query: 318 DIDPSSISKRVKVDIPIVGNVKDVLQELIAQI--KASDIKPKREALAKWWEQIEQWRSVD 375
           DIDP+SI K V VD+PIVG++KDVL +L   +  K   ++   E    W   I +WR   
Sbjct: 300 DIDPTSIGKNVGVDLPIVGDLKDVLGKLHGYLDKKPELVEDLIEGTEDWRAMIAEWRVRQ 359

Query: 376 CLKYDRSSEIIKPQYVVEKIWELTKGDAFICSDVGQHQMWAAQFYKFDEPRRWINSGGLG 435
            + Y  S  +IKPQ+V+EKI E+T  DA I ++VGQHQMWAAQFY F +PR ++ SGGLG
Sbjct: 360 PMTYRSSKSVIKPQFVIEKISEMTAEDAIITTEVGQHQMWAAQFYTFRKPRTFLTSGGLG 419

Query: 436 TMGVGLPYAMGIKKAFPEKEVVTITGEGSIQMCIQELSTCLQYDTPVKICSLNNGYLGMV 495
           TMG GLP A+G + A+P+++V+ I+G+GS QM  QEL+T +QY  PVKI  LNN YLGMV
Sbjct: 420 TMGFGLPSALGAQVAYPDRQVIDISGDGSFQMNSQELATLVQYQLPVKIAILNNNYLGMV 479

Query: 496 RQWQEIEYDNRYSHSYMDALPDFVKLAEAYGHVGMRVEKTSDVEPALREAFRLKDRTVFL 555
           RQWQ++ ++ RYS + M+   DF+KLAEAYG  G++  K  +VE  +++A       V +
Sbjct: 480 RQWQQMFFEKRYSQTVMELPIDFIKLAEAYGATGLQATKVDEVEATIKQALETPG-PVLM 538

Query: 556 DFQTDPTENVWPMVQAGKGISEMLLGA 582
           +F+    ENV PMV AGK I EM+L +
Sbjct: 539 NFKVSREENVLPMVPAGKAIHEMVLAS 565


Lambda     K      H
   0.319    0.135    0.407 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 858
Number of extensions: 28
Number of successful extensions: 5
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 585
Length of database: 565
Length adjustment: 36
Effective length of query: 549
Effective length of database: 529
Effective search space:   290421
Effective search space used:   290421
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (25.0 bits)

Align candidate WP_092345614.1 BLU87_RS05645 (biosynthetic-type acetolactate synthase large subunit)
to HMM TIGR00118 (ilvB: acetolactate synthase, large subunit, biosynthetic type (EC 2.2.1.6))

Software error:

../bin/blast/fastacmd -i /tmp/list.18413.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.18413.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.

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