Align acetohydroxyacid synthase subunit B (EC 2.2.1.6) (characterized)
to candidate WP_092348746.1 BLU87_RS11925 biosynthetic-type acetolactate synthase large subunit
Query= metacyc::MONOMER-18810
(585 letters)
>NCBI__GCF_900107645.1:WP_092348746.1
Length = 588
Score = 421 bits (1083), Expect = e-122
Identities = 243/583 (41%), Positives = 345/583 (59%), Gaps = 33/583 (5%)
Query: 19 MIGAEILVHALAEEGVEYVWGYPGGAVLYIYDELHKQTKFEHILVRHEQAAVHAADGYAR 78
M G ++L+ AL + GV+Y++GY GGA++ ++DE+ K F ++ RHEQ A A G +R
Sbjct: 1 MTGKKLLLKALKDRGVKYIFGYTGGAIMPVFDEMEKLENFTFVMSRHEQGAAFMAQGVSR 60
Query: 79 A---TG--KVGVALVTSGPGVTNAVTGIATAYLDSIPMVVITGNVPTHAIGQDAFQECDT 133
A TG ++GV + TSGPG N VTGIA A++DSIPM+ ITG V T I DAFQE D
Sbjct: 61 ASLSTGHPQIGVCMSTSGPGAMNLVTGIADAHMDSIPMLAITGQVATGVIATDAFQESDV 120
Query: 134 VGITRPIVKHNFLVKDVRDLAATIKKAFFIAATGRPGPVVVDIPKDVSRNACKYEYPKSI 193
VG+ PI K ++ D+ TI + F++A TGR GPVV+DIPKDV ++Y
Sbjct: 121 VGVMMPICKQTYMPLYADDIEKTIHEGFYVATTGRGGPVVIDIPKDVQNAQVSHDY--QF 178
Query: 194 DMRSYNPVNKGH-------SGQIRKAVALLQGAERPYIYTGGGVVLANASDELRQLAALT 246
D ++ P G+ +++A+ L+ +ERP ++ G GV+ +NA L++ A
Sbjct: 179 DPVAFRPHLPGYFYSPTPEREPLQRAIELINRSERPVMFCGHGVINSNAGQLLQKFAEKV 238
Query: 247 GHPVTNTLMGLGAFPGTSKQFVGMLGMHGTYEANMAMQNCDVLIAIGARFDDRVIGNPAH 306
PV TL GL A P +GM+GMHGT EAN A+ D+LI+ G RFDDRV G
Sbjct: 239 NIPVAFTLHGLSAMPADHPLSLGMMGMHGTVEANRAILEADLLISFGMRFDDRVTGKLNE 298
Query: 307 FTSQARKIIHIDIDPSSISKRVKVDIPIVGNVKDVLQELIAQIKASDIKPKREALAKWWE 366
+ A +IH++IDPS I K V+ + I +V L L+ + KP+R +W E
Sbjct: 299 YAQNA-DVIHVEIDPSEIDKNVRTSVAINADVYRTLHVLLDDPMVT-FKPRR----RWLE 352
Query: 367 QIEQWRSVDCLKYDRSSEI---------IKPQYVVEKIWELTKGDAFICSDVGQHQMWAA 417
I+ +R+V + ++EI + + ++ ++ E+T+G I SDVGQHQM AA
Sbjct: 353 TIDVFRNV--MAESLAAEIAHGVGTGNKLLMKTIIHQLSEVTQGRDLIVSDVGQHQMMAA 410
Query: 418 QFYKFDEPRRWINSGGLGTMGVGLPYAMGIKKAFPEKEVVTITGEGSIQMCIQELSTCLQ 477
+FY + W SGG GTMG LP A+G+K A P++ V +I+G+G QM QEL T ++
Sbjct: 411 RFYNYQTNNSWYASGGAGTMGCSLPMAVGVKLARPDERVWSISGDGGFQMNAQELGTIME 470
Query: 478 YDTPVKICSLNNGYLGMVRQWQEIEYDNRYSHSYMDALPDFVKLAEAYGHVGMRVEKTSD 537
++ VKI LNNGYLGMVRQWQ +D Y+ + M + PDF LA+AYG +VE D
Sbjct: 471 HNIDVKIIILNNGYLGMVRQWQTFFFDGCYAGTPMQS-PDFKLLAQAYGIPHRKVENLED 529
Query: 538 VEPALREAFRLKDRTVFLDFQTDPTENVWPMVQAGKGISEMLL 580
V PAL+EA + V L+F DPTE V PMV +G G +M++
Sbjct: 530 VTPALQEAIDHQGPMV-LEFICDPTEVVLPMVPSGGGFEDMIV 571
Lambda K H
0.319 0.135 0.407
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 871
Number of extensions: 56
Number of successful extensions: 6
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 585
Length of database: 588
Length adjustment: 37
Effective length of query: 548
Effective length of database: 551
Effective search space: 301948
Effective search space used: 301948
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (25.0 bits)
Align candidate WP_092348746.1 BLU87_RS11925 (biosynthetic-type acetolactate synthase large subunit)
to HMM TIGR00118 (ilvB: acetolactate synthase, large subunit, biosynthetic type (EC 2.2.1.6))
../bin/blast/fastacmd -i /tmp/list.19809.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.19809.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.
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