Align aspartate semialdehyde dehydrogenase subunit (EC 1.2.1.11) (characterized)
to candidate WP_092482508.1 BM299_RS05750 aspartate-semialdehyde dehydrogenase
Query= metacyc::MONOMER-6564
(346 letters)
>NCBI__GCF_900115975.1:WP_092482508.1
Length = 339
Score = 331 bits (849), Expect = 1e-95
Identities = 174/336 (51%), Positives = 233/336 (69%), Gaps = 9/336 (2%)
Query: 7 VAVVGATGAVGQQMLKTLEDRNFEMDTLTLLSSKRSAGTKVTFKGQELTVQEASPESFEG 66
V +VGATGAVGQ++L+ L +RNF + L L ++ RSAG ++ FKG+ TV+E +P SF+G
Sbjct: 6 VVIVGATGAVGQEILQVLAERNFPVGELKLCATARSAGKEIFFKGKSYTVEETTPASFDG 65
Query: 67 VNIALFSAGGSVSQALAPEAVKRGAIVIDNTSAFRMDENTPLVVPEVNEADLHEHNGIIA 126
++IALF AGG+ S+ P A ++G +VIDN+S FR+D PLVVPEVN D+ EH GIIA
Sbjct: 66 MDIALF-AGGAASKEFGPLAAEKGVVVIDNSSHFRLDPQVPLVVPEVNPEDVKEHRGIIA 124
Query: 127 NPNCSTIQMVAALEPIRKAYGLNKVIVSTYQAVSGAGNEAVKELYSQTQAILNKEEIEPE 186
NPNCSTI MV L+ I A G+ +V+VSTYQAVSGAG E + EL T+A+L+ +E+ P
Sbjct: 125 NPNCSTIIMVVPLKAIYDAAGIKRVVVSTYQAVSGAGAEGITELTEHTRAVLDGKEVIPA 184
Query: 187 IMPVKGDKKHYQIAFNAIPQIDKFQDNGYTFEEMKMINETKKIMHMPDLQVAATCVRLPI 246
K YQIAFN IP ID FQ+ YT EE KM+ ET+KI+H + + AT VR+P+
Sbjct: 185 -------KFQYQIAFNLIPHIDVFQEMDYTKEEWKMVKETRKILHDDTVGITATTVRVPV 237
Query: 247 QTGHSESVYIEIDRDDATVEDIKNLLKEAPGVTLQDDPSQQLYPMPADAVGKNDVFVGRI 306
HSES+ +E R TV++ K +L + PGV ++DDP+ + YPMP K+DVFVGRI
Sbjct: 238 YRSHSESINVETKR-KITVDEAKKVLADFPGVVVEDDPANKKYPMPLFTSEKDDVFVGRI 296
Query: 307 RKDLDRANGFHLWVVSDNLLKGAAWNSVQIAESLKK 342
R+D N ++WVV+D L KGAA N+VQIAE + K
Sbjct: 297 RQDNSLDNALNMWVVADQLRKGAATNAVQIAELVIK 332
Lambda K H
0.314 0.131 0.366
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 322
Number of extensions: 12
Number of successful extensions: 4
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 346
Length of database: 339
Length adjustment: 29
Effective length of query: 317
Effective length of database: 310
Effective search space: 98270
Effective search space used: 98270
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 49 (23.5 bits)
Align candidate WP_092482508.1 BM299_RS05750 (aspartate-semialdehyde dehydrogenase)
to HMM TIGR01296 (asd: aspartate-semialdehyde dehydrogenase (EC 1.2.1.11))
../bin/blast/fastacmd -i /tmp/list.21385.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.21385.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.
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