Alignments for a candidate for argA in Thiohalomonas denitrificans HLD2

Align amino-acid N-acetyltransferase (EC 2.3.1.1) (characterized)
to candidate WP_092992187.1 BLP65_RS02360 amino-acid N-acetyltransferase

Query= BRENDA::P22567
         (432 letters)



>NCBI__GCF_900102855.1:WP_092992187.1
          Length = 442

 Score =  463 bits (1191), Expect = e-135
 Identities = 240/432 (55%), Positives = 307/432 (71%), Gaps = 2/432 (0%)

Query: 3   DYVNWLRHASPYINSHRDRTFVVMLPGEGVEHPNFGNIVHDLVLLHSLGARLVLVHGSRP 62
           DYV+W R+++PYIN+ R RTFVV   GE V    F ++VHD+ LL+SLG RLVLVHG+RP
Sbjct: 11  DYVHWFRNSAPYINAFRGRTFVVAFGGEVVAEKQFASLVHDIALLNSLGVRLVLVHGARP 70

Query: 63  QIEARLAARGLAPRYHRDLRVTDAPTLECVIDAVGSLRIAIEARLSMDMAASPMQGARLR 122
           QIE RL  RG   +Y   LRVTD   L CV +A G++R+ IEA LSM +A SPM GA +R
Sbjct: 71  QIEERLRERGAKMKYVNGLRVTDEQALACVKEATGTVRVEIEALLSMGLANSPMAGAEIR 130

Query: 123 VAGGNLVTARPIGVVEGVDYHHTGEVRRIDRKGIGRLLDERSIVLLSPLGYSPTGEIFNL 182
           VA GN VTA+P+G+  GVDY HTGEVRRI    + + LD+ +IVLLSPLGYSPTGEIFNL
Sbjct: 131 VASGNFVTAQPLGIRNGVDYLHTGEVRRIAESAVRKQLDDGAIVLLSPLGYSPTGEIFNL 190

Query: 183 ACEDVAMRAAIDLEAEKLILYGAEQGLLDASGKLVRELRPQQVPAHLQRLGNSYQ--AEL 240
           + EDVA  AA++L A KLI      GL D  G LVRE+   +        G+  +  A+ 
Sbjct: 191 SAEDVATAAAVELGASKLIYLVDGPGLTDKDGNLVREISLDEAAEWFDGHGDIPEGIAKC 250

Query: 241 LDAAAQACRAGVKRSHIVSYTEDGALLSELFTRTGNGTLVAQEQFEQLREAGIEDVGGLI 300
           L +A  A   GV+R+H++   +DG+LL ELFTR G GTLV  E +E  R A I+DVGG++
Sbjct: 251 LFSAQFAGSEGVRRAHLIDRHQDGSLLLELFTRDGVGTLVTAESYEDTRPATIDDVGGIL 310

Query: 301 ELIRPLEEQGILVRRSREVLEREIEQFSIVEREGLIIACAALYPIADSEAGELACLAVNP 360
           ELI PLEE+G+LVRRSRE LE EI+ F +VER+G+ +A A LYP  +   GELACLAV+P
Sbjct: 311 ELIAPLEEEGVLVRRSREWLEMEIDHFIVVERDGMTVASATLYPFPEERVGELACLAVHP 370

Query: 361 EYRHGGRGDELLERIEERARGLGLKTLFVLTTRTAHWFRERGFQPSSVERLPAARASLYN 420
           +YR+ GRGD LLE +E +AR LG++ LFVLTTRTAHWF+ERGF+ ++++ LP  R  +YN
Sbjct: 371 DYRNLGRGDALLEYVERKARKLGVERLFVLTTRTAHWFQERGFRTATLKELPVKRQEMYN 430

Query: 421 FQRNSQVFEKSL 432
           +QR S+VF K L
Sbjct: 431 YQRRSKVFIKEL 442


Lambda     K      H
   0.321    0.138    0.398 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 590
Number of extensions: 16
Number of successful extensions: 2
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 432
Length of database: 442
Length adjustment: 32
Effective length of query: 400
Effective length of database: 410
Effective search space:   164000
Effective search space used:   164000
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 51 (24.3 bits)

Align candidate WP_092992187.1 BLP65_RS02360 (amino-acid N-acetyltransferase)
to HMM TIGR01890 (argA: amino-acid N-acetyltransferase (EC 2.3.1.1))

Software error:

../bin/blast/fastacmd -i /tmp/list.20574.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.20574.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.

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