Alignments for a candidate for ilvI in Thermodesulforhabdus norvegica DSM 9990

Align acetohydroxyacid synthase subunit B (EC 2.2.1.6) (characterized)
to candidate WP_093393436.1 BM091_RS03295 biosynthetic-type acetolactate synthase large subunit

Query= metacyc::MONOMER-18810
         (585 letters)



>NCBI__GCF_900114975.1:WP_093393436.1
          Length = 570

 Score =  632 bits (1630), Expect = 0.0
 Identities = 320/571 (56%), Positives = 410/571 (71%), Gaps = 11/571 (1%)

Query: 18  EMIGAEILVHALAEEGVEYVWGYPGGAVLYIYDELHKQTKFEHILVRHEQAAVHAADGYA 77
           ++ GA+I    L  EGVE ++GYPGGAVL IY E+ K     HILVRHEQ A H ADGYA
Sbjct: 2   KLTGAQIFFECLKREGVEVIFGYPGGAVLDIYHEMPKHN-IRHILVRHEQGAAHMADGYA 60

Query: 78  RATGKVGVALVTSGPGVTNAVTGIATAYLDSIPMVVITGNVPTHAIGQDAFQECDTVGIT 137
           RA+GKVGV LVTSGPG TN VTGIATAY+DSIP+VV TG VPT  IG DAFQE D VGIT
Sbjct: 61  RASGKVGVCLVTSGPGATNTVTGIATAYMDSIPIVVFTGQVPTALIGNDAFQEVDIVGIT 120

Query: 138 RPIVKHNFLVKDVRDLAATIKKAFFIAATGRPGPVVVDIPKDVSRNACKYEYPKSIDMRS 197
           RP  KHN+LVKDVRDL   IK+AF++A +GRPGPV+VD+PKDV + +    YP+++++R 
Sbjct: 121 RPCTKHNYLVKDVRDLPRIIKEAFYLARSGRPGPVLVDLPKDVIQASTNLSYPETVNLRG 180

Query: 198 YNPVNKGHSGQIRKAVALLQGAERPYIYTGGGVVLANASDELRQLAALTGHPVTNTLMGL 257
           Y P  + H GQ++KA   ++ A+RP IY GGGV+ ++A +EL + A +   PVT TLMGL
Sbjct: 181 YKPTVEPHRGQLKKAAQAIRKAQRPVIYAGGGVIHSSARNELTKFAEMLQIPVTTTLMGL 240

Query: 258 GAFPGTSKQ--------FVGMLGMHGTYEANMAMQNCDVLIAIGARFDDRVIGNPAHFTS 309
           GAFP  +++        ++GMLGMHGT+ ANMA+ +CD+L AIGARFDDRV G    F  
Sbjct: 241 GAFPAVTEKGTFNLHPLWLGMLGMHGTFRANMAVTHCDLLFAIGARFDDRVTGKVEGFAP 300

Query: 310 QARKIIHIDIDPSSISKRVKVDIPIVGNVKDVLQELIAQIKASDIKPKREALAKWWEQIE 369
           +A KIIHID+DP+SISK V+VDIPIVG+ K  L+ LI   +   ++   E  A W +QIE
Sbjct: 301 KA-KIIHIDVDPTSISKNVRVDIPIVGDCKRALRYLIEMFQEEPLENVEERRAPWLKQIE 359

Query: 370 QWRSVDCLKYDRSSEIIKPQYVVEKIWELTKGDAFICSDVGQHQMWAAQFYKFDEPRRWI 429
           +W+    L Y +    IKPQ+V+EKI+EL++GDA I ++VGQ+QMW AQ+Y F EPR  I
Sbjct: 360 EWKKTYPLAYKQQEGRIKPQFVIEKIYELSRGDAIIATEVGQNQMWTAQYYHFTEPRTLI 419

Query: 430 NSGGLGTMGVGLPYAMGIKKAFPEKEVVTITGEGSIQMCIQELSTCLQYDTPVKICSLNN 489
            SGGLGTMG G P A+G + A P+K V+ I G+GSIQM IQEL T +  + PVK+  LNN
Sbjct: 420 TSGGLGTMGYGFPAAIGAQVARPDKLVIDIAGDGSIQMNIQELITAVCNELPVKVAILNN 479

Query: 490 GYLGMVRQWQEIEYDNRYSHSYMDALPDFVKLAEAYGHVGMRVEKTSDVEPALREAFRLK 549
           GYLGMVRQWQE+ Y+  Y  + ++  PDFVKLAEAYG VG+R  K  +VEP +++AF + 
Sbjct: 480 GYLGMVRQWQELFYEKNYCATCLEGGPDFVKLAEAYGAVGLRATKPEEVEPVIKKAFEI- 538

Query: 550 DRTVFLDFQTDPTENVWPMVQAGKGISEMLL 580
            + V +DF  +P E V+PMV AGK I+EMLL
Sbjct: 539 PKPVLMDFVVEPEEGVYPMVPAGKTITEMLL 569


Lambda     K      H
   0.319    0.135    0.407 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 964
Number of extensions: 32
Number of successful extensions: 5
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 585
Length of database: 570
Length adjustment: 36
Effective length of query: 549
Effective length of database: 534
Effective search space:   293166
Effective search space used:   293166
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (25.0 bits)

Align candidate WP_093393436.1 BM091_RS03295 (biosynthetic-type acetolactate synthase large subunit)
to HMM TIGR00118 (ilvB: acetolactate synthase, large subunit, biosynthetic type (EC 2.2.1.6))

Software error:

../bin/blast/fastacmd -i /tmp/list.2083.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.2083.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.

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