Align Phosphoribosyl-AMP cyclohydrolase; PRA-CH; EC 3.5.4.19 (characterized)
to candidate WP_093395033.1 BM091_RS08630 phosphoribosyl-AMP cyclohydrolase
Query= SwissProt::O26347
(138 letters)
>NCBI__GCF_900114975.1:WP_093395033.1
Length = 125
Score = 146 bits (368), Expect = 1e-40
Identities = 70/118 (59%), Positives = 88/118 (74%), Gaps = 3/118 (2%)
Query: 20 GEDLIIAVAQDHETGEVLMVAYMNREALRRTLETGTAHYWSTSRGKLWLKGESSGHVQRV 79
G ++ V QD E+ +VLM+AYMN EA R+T+ETG AHYWS SRGK+W KGE+SGH Q V
Sbjct: 9 GGGILPVVVQDAESLKVLMLAYMNEEAWRKTVETGKAHYWSRSRGKIWQKGETSGHFQEV 68
Query: 80 KDVLVDCDGDAVVLKVEQE-GGACHTGYRSCFYRSIDGDELKVREDAVKVFDPEEIYG 136
++L+DCD D +++KV Q GGACH GY SCFYR IDGD V E +VF+PEE+YG
Sbjct: 69 LEILIDCDMDTILIKVRQHGGGACHEGYGSCFYRRIDGDGWAVVEP--RVFNPEEVYG 124
Lambda K H
0.318 0.137 0.410
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 105
Number of extensions: 5
Number of successful extensions: 3
Number of sequences better than 1.0e-02: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 138
Length of database: 125
Length adjustment: 14
Effective length of query: 124
Effective length of database: 111
Effective search space: 13764
Effective search space used: 13764
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 41 (20.4 bits)
Align candidate WP_093395033.1 BM091_RS08630 (phosphoribosyl-AMP cyclohydrolase)
to HMM PF01502 (PRA-CH)
../bin/blast/fastacmd -i /tmp/list.22027.in -d ../tmp/orgsDef_201/orgs.faa -p T > /tmp/gapView.22027.genome.faa failed: Inappropriate ioctl for device at ../lib/pbutils.pm line 379.
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